Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3261 ATGGCGAAAGAACAAATCCAGGTGCTAAATGCACTCGATGTGGCCAAAACACAATGGTACCATTTCACTGCAATTATAGTTGCTGGAATGGGCTTCTTCACTGATGCATATGATCTATTCTGCATATCCCTTGTCACCAAGTTGCTAGGCCGCATTTACTACCACGTTGATGGCGCGGCGAAGCCCGGAACATTGCCTCCCAATGTATCAGCAGCTGTAAATGGCGTAGCTTTCTGTGGTACACTTTCAGGACAGCTTTTCTTTGGCTGGCTTGGTGACAAAATGGGAAGAAAAAAAGTCTATGGCATGACCCTAATGGTGATGGTGATATGTTCTATTGGTTCTGGCCTTTCATTTGGAAATAGTCCAAAATCTGTGATGGCAACACTTTGCTTCTTCCGCTTCTGGCTTGGATTTGGAGTTGGTGGAGACTACCCTCTTTCTGCTACCATAATGTCTGAGTATTCTAATAAGAAGACTCGCGGAGCCTTCATCGCCGCGGTCTTTGCAATGCAGGGTTTTGGAATTCTGGCAGGTGGTATATTTGCTATTATAATTGCTACTGCATTCAAGGCTAAGTTTGATGCTCCGCCTTATGAGGTTGATCCCGTCGGTTCGACCGTTTTGGAAGCGGACTATATTTGGAGGATAATTGTCATGGTTGGAGCATTGCCAGCTGCATTGACATACTATTGGAGGATGAAGATGCCGGAAACCGCTCGCTATACTGCTCTAGTTGCGAAGAACACAGAACAGGCTGCAAAGGATATGTCTAAGGTTCTTCAGGTTGAGATTGAAGCTGAGCCGAAAAATGATCAAGCACAGGCCAAAGCATTTGGCTTGTTCTCAAAGGAGTTTCTCCGCCGCCACGGGATGCATCTTCTCGGCACAACAAGCACATGGTTCTTGCTTGATATTGCATTTTACAGCCAGAATCTCTTCCAGAAAGACATCTTCAGCGCAATTGGTTGGATCCCTCCAGCAAAAACCATGAATGCCATTGAGGAAGTTTACAGAATTGCAAGAGCTCAGACGCTTATTGCTCTCTGCAGTACTGTTCCTGGCTACTGGTTTACAGTGACTTTTATAGACAGGATTGGAAGATTTCGTATTCAATTGATGGGGTTCTTCTTCATGACAGTCTTCATGTTTGCTCTTGCCATTCCTTATGACCACTGGACTCATAAGGAGAACAGAATAGGTTTCGTGGTGATGTATTCCCTGACTTTCTTCTTCGCGAATTTCGGGCCTAATGCCACCACATTCGTCGTGCCGGCCGAGATTTTCCCGGCTAGATTCCGGTCCACTTGCCACGGAATTTCGTCCGCAGCCGGGAAGCTCGGGGCTATAGTCGGAGCATTCGGGTTCTTGTACCTGGCACAGAACAAGGACAAGAGCAAAGCAGATGCAGGGTACCCTGCAGGTATTGGAGTGAAGAATTCACTGCTTATGTTGGGCGTGGTCAACATTTTAGGATTCTTTTGTACTTTCTTGGTGCCTGAGGGAAAGGGAAAATCTTTGGAGGAAATGTCAGGTGAGAATGAAGAGGAAGGTTGA 1557 0.4624 MAKEQIQVLNALDVAKTQWYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAAKPGTLPPNVSAAVNGVAFCGTLSGQLFFGWLGDKMGRKKVYGMTLMVMVICSIGSGLSFGNSPKSVMATLCFFRFWLGFGVGGDYPLSATIMSEYSNKKTRGAFIAAVFAMQGFGILAGGIFAIIIATAFKAKFDAPPYEVDPVGSTVLEADYIWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNTEQAAKDMSKVLQVEIEAEPKNDQAQAKAFGLFSKEFLRRHGMHLLGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAKTMNAIEEVYRIARAQTLIALCSTVPGYWFTVTFIDRIGRFRIQLMGFFFMTVFMFALAIPYDHWTHKENRIGFVVMYSLTFFFANFGPNATTFVVPAEIFPARFRSTCHGISSAAGKLGAIVGAFGFLYLAQNKDKSKADAGYPAGIGVKNSLLMLGVVNILGFFCTFLVPEGKGKSLEEMSGENEEEG* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3261 518 CDD MFS_PhT 25 503 - -
Lja1g3261 518 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-7-RELATED 1 517 - -
Lja1g3261 518 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 1 517 - -
Lja1g3261 518 TIGRFAM 2A0109: phosphate:H+ symporter 11 513 IPR004738 GO:0005315|GO:0006817|GO:0016021
Lja1g3261 518 Pfam Sugar (and other) transporter 26 511 IPR005828 GO:0016021|GO:0022857|GO:0055085
Lja1g3261 518 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 504 IPR020846 GO:0022857
Lja1g3261 518 Gene3D MFS general substrate transporter like domains 20 518 IPR036259 -
Lja1g3261 518 SUPERFAMILY MFS general substrate transporter 12 511 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3261 Lja-Chr1 40257298 40258854 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3261 1 517 Inorganic Solute Cotransporters AT3G54700 83.752 0.0 919
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3261 K08176 - gmx:100819445 927.932