Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3247 ATGAGTTCCGATCAGCCACTGCTTTCGGAACCAGATCTTCATCCAGTCATCCACCACCGCCACCGCAAATCGGGACAATCCCGGACCACCTGCCTCTGCTCCTTCGACGACGACGCCGCCGTTGTTGTTGTTCCTCACCCTCCCCTAACCTCCGATCCCGCCTCGGACGACGTCGTTTTGGCCAGCGACCGCAGCTTCCACGCTGCGTTCTGCAACAGCACCAGCTCCTCCTCTTTTGCCACCACCGACCGTGATTTCTGCTCCGTCGCGTCTCAATTCTCCGGGCAGTTTCCGTTGGAATGCCCCACGCCGCGCGAGAGGTCCACGCGCAATCTATCGTGGGGTACAATGGAACTGCACGATGCCCATGCCGATAGTGCCAATGCCAATGCCGGTACCATTCACCGCGCGGCTGCGTCGTTTGAAATATCCTCCACGGCGGCACCACCACCACCGGGACCTTCTCAGAGGATTCGTCATAAGAGCATGCAATTCGACGATGTAGCCTTACATGAAGATAGTGCCAGGTTGATCTATATCAATGACCCTAGGAAAACTAATGACAAGTATGAGTTTACTGGGAATGAGATTACAACTAGCAAATACACTTTTTTAACATTCTTGCCGAAAAATCTGTTCATTCAGTTCCATAGGGTTGCTTATTTGTATTTCCTTGCTATCGCGGCGCTTAATCAGCTTCCTCCGTTGGCTGTGTTTGGGAGGACAGTGTCCCTTTTTCCCTTGTTGTTTGTGCTCTGTGTTACAGCTATTAAGGATGGTTATGAGGATTGGCGGAGGCACAGGTCGGATCGGAATGAAAACAATAGGGAATCTTTAGTGCTTCAGTTTGGTGATTTTCGATCGAAGAAATGGAAGAAGATACAAGCTGGTGAGGTTGTCAAGATATTTGCTGACGAGACGATTCCAGCTGATATGGTGTTGTTGGGGACAAGTGATCCGAGTGGTCTCGCCTATATTCAGACGATGAATTTGGATGGGGAGTCGAATTTGAAGACGAGGTATGCAAGGCAGGAAACTGCTTCTGCGGTTTTATCAGAGGCTTGTAATGTTTCTGGGTTTATCAGATGCGAACAGCCGAACCGGAATATCTATGAGTTCACAGCTAACATGGAGTTCAATGGGCTCAAGTTTTCCCTTAGTCAGTCGAACATTGTGCTGCGTGGTTGCCAGCTGAAGAACACGGATTGGATAATTGGTGTTGTGGTTTATGCAGGACAGGAAACGAAAGCCATGTTGAACAGTGCACCTTCTCCTTCTAAGAGAAGCAGGTTGGAGAGCTACATGAACAGGGAGACCCTTTGGTTGTCAATTTTCCTCTTTATCATGTGTTTGGTTGTGGCCCTTGGGATGTGTCTTTGGCTGGTACGCCACAAAAACCAGCTTGATTCCCTGCCTTACTATAGAAAAAGATACCTCAACAATGGGCCAGATAAGGGAAAGAAATACAAGTATTATGGGATACCGATGGAAGCATTTTTCGCTTTTTTGAGTGCTATTATTGTGTTTCAGATAATGATACCAATATCTCTTTACATTACAATGGAGTTGGTTCGATTGGGTCAGTCATACTTCATGATTGAAGACAGGGATATGTTTGACATTAGCTCTGGATCTAGATTTCAGTGTAGATCATTAAATATAAATGAAGACTTGGGTCAAATACGCTATGTATTTTCAGACAAGACAGGAACACTAACAGAAAACAAGATGGAATTCCAGAGGGCTAGTGTACATGGGAAGAATTATGGCAGCTCCTTGCTTGTGGCTGATAGCAACGCAGCATCAGCAGCAGCTGTCACTCCTGAACGGAGATGGAAGCTCAAATCTGAAATTGCAGTTGATTCCAAACTGTTGACCATGTTGTGGAAAGACTCAAATAGAGATGAAAGAATTGCTGCTCATGAGTTTTTTCTTACATTGGCTGCTTGTAATACTGTGATCCCTATAATTAATGATGGTGGATTTTCTGGTTGTGGATCAAGTGAACCAAATGAAGATATAGATTGCATTCATTACCAGGGAGAATCTCCTGATGAACAAGCTCTAGTTTCTGCAGCCTCTTCATATGGATATACTCTTTTTGAGCGAACATCTGGACATATTGTTATTGACGTCAATGGTGAGAAACTCAGATTGGACGTATTGGGCTTGCATGAGTTTGATAGTGTGCGAAAGAGAATGTCTGTTGTTATTCGGTTTCCCGACAATGTTGTAAAGGTGTTAGTCAAAGGCGCTGATACATCAATGTTTAGCATTTTGGCAAGCGACAGTGAGAACAACAATAGCATATGGCATGCAACTCAGAACCATTTAAATGAATATTCTTCACAAGGTTTGCGCACTCTTGTAATTGCCTCCAGGGATCTTTCTGATGCTGAGCTTGAGGAGTGGCAAGACAGGTATGAAGAGGCAAGCACTTCATTGACTGACAGAGCTGCTAAACTACGTCAAACAGCGGCACTTATAGAATGTAATTTAAAGCTACTTGGAGCAACTGGAATTGAGGACAAGCTGCAAGAGGGTGTACCTGAAGCCATCGAGTCCCTGCGGCAAGCTGGAATCAAGGTCTGGGTTCTTACAGGTGATAAGCAAGAGACAGCAATTTCAATTGGTCTTTCCTGCAAACTTCTCAGTGCTGATATGCAGCAGATTATTATAAATGGCACTTCAGAAGATGAATGCAGAAGTCTTTTGTCTGATGCTAAAGCCAAATATTGTGTGAGATCTTCAAGTGGAGGGCGCCGTAATATGAAGTGCAAAACCACTGCTGGACATTGTGAACTTGATATTCCCAATGGTTTAAAATCGAGTTTACCCAAGTGGAATCCAGGAAAGGAAGAAAGTACTACTACTCCATTGGCACTCATAATTGATGGAAACAGTTTGGTTTATATTTTGGAGAAGGAACTGGAGTCAGAGCTTTTCGACCTTGCAACTTCCTGTAGGGTTGTGCTGTGTTGTCGTGTTGCACCCTTGCAGAAGGCAGGAATTGTTGATCTGATAAAGAGCCGCACAGATGATATGACACTGGCCATTGGCGACGGAGCCAATGACGTGTCAATGATCCAAATGGCAGATGTTGGTGTTGGATTATGTGGACAGGAAGGGCGCCAAGCAGTGATGGCAGCAGATTTTGCTATGGGACAATTTCGGTTCTTGAAAAGATTACTCCTGGTTCATGGGCACTTGAATTATCAGCGTGTTGGTTATCTAGTTCTGTACAACTTTTACCGAAATGCTGTCTTTGTATTGATGTTATTCTGGTATATATTATGCACAGCTTTTTCTACAACTTCTGCATTGACAGATTGGAGTAGTGTATTCTATTCTGTGATATACACATCTGTACCTACTATTATTGTTGGTATTCTGGACAAAGACTTGAGTCACAGGACACTCTTGCAGTATCCAAAACTATATTGTACTGGCCACAGGCAAGAAGCTTACAATATGCAATTATTTTGGATCACAATGATTGACACAGTATGGCAGAGCCTTGTTCTCTTCTACACACCGTTGTTCACCTATAAGGACAGTTCAATTGATATATGGAGCATGGGCAGTTTGTGGACAATTGCAGTTGTTGTCCTTGTAAATGTACACCTGGCTATGGACATCAATCGTTGGGTATTAGTTACTCATTGCGCAGTCTGGGGATCAATAATCACTACATATGGCTGTATGGTGGTATTGGATTCTATACCTGCCTTTCCCAATTACTGGACTATTTATCATCTGGCAAGGTCCCCTACATATTGGATAACAATTTTACTTATAATAGTTGTGGGATTGCTCCCTCGCTTTACTTGTAAAGTTGTATGTCAAATATTTTGGCCTTCAGATATCCAGATAGCAAGAGAAGCTGAGCTAATGAGAAAACAACATGATCGTGTGCAGTCAAGGCAACAAGTTTCCAGCTAA 3942 0.4394 MSSDQPLLSEPDLHPVIHHRHRKSGQSRTTCLCSFDDDAAVVVVPHPPLTSDPASDDVVLASDRSFHAAFCNSTSSSSFATTDRDFCSVASQFSGQFPLECPTPRERSTRNLSWGTMELHDAHADSANANAGTIHRAAASFEISSTAAPPPPGPSQRIRHKSMQFDDVALHEDSARLIYINDPRKTNDKYEFTGNEITTSKYTFLTFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDGYEDWRRHRSDRNENNRESLVLQFGDFRSKKWKKIQAGEVVKIFADETIPADMVLLGTSDPSGLAYIQTMNLDGESNLKTRYARQETASAVLSEACNVSGFIRCEQPNRNIYEFTANMEFNGLKFSLSQSNIVLRGCQLKNTDWIIGVVVYAGQETKAMLNSAPSPSKRSRLESYMNRETLWLSIFLFIMCLVVALGMCLWLVRHKNQLDSLPYYRKRYLNNGPDKGKKYKYYGIPMEAFFAFLSAIIVFQIMIPISLYITMELVRLGQSYFMIEDRDMFDISSGSRFQCRSLNINEDLGQIRYVFSDKTGTLTENKMEFQRASVHGKNYGSSLLVADSNAASAAAVTPERRWKLKSEIAVDSKLLTMLWKDSNRDERIAAHEFFLTLAACNTVIPIINDGGFSGCGSSEPNEDIDCIHYQGESPDEQALVSAASSYGYTLFERTSGHIVIDVNGEKLRLDVLGLHEFDSVRKRMSVVIRFPDNVVKVLVKGADTSMFSILASDSENNNSIWHATQNHLNEYSSQGLRTLVIASRDLSDAELEEWQDRYEEASTSLTDRAAKLRQTAALIECNLKLLGATGIEDKLQEGVPEAIESLRQAGIKVWVLTGDKQETAISIGLSCKLLSADMQQIIINGTSEDECRSLLSDAKAKYCVRSSSGGRRNMKCKTTAGHCELDIPNGLKSSLPKWNPGKEESTTTPLALIIDGNSLVYILEKELESELFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGLCGQEGRQAVMAADFAMGQFRFLKRLLLVHGHLNYQRVGYLVLYNFYRNAVFVLMLFWYILCTAFSTTSALTDWSSVFYSVIYTSVPTIIVGILDKDLSHRTLLQYPKLYCTGHRQEAYNMQLFWITMIDTVWQSLVLFYTPLFTYKDSSIDIWSMGSLWTIAVVVLVNVHLAMDINRWVLVTHCAVWGSIITTYGCMVVLDSIPAFPNYWTIYHLARSPTYWITILLIIVVGLLPRFTCKVVCQIFWPSDIQIAREAELMRKQHDRVQSRQQVSS* 1314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3247 1313 Gene3D - 251 420 - -
Lja1g3247 1313 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 166 1311 - -
Lja1g3247 1313 Gene3D - 678 814 IPR023299 GO:0000166
Lja1g3247 1313 ProSitePatterns E1-E2 ATPases phosphorylation site. 567 573 IPR018303 -
Lja1g3247 1313 SFLD p-type atpase 549 1069 IPR044492 -
Lja1g3247 1313 SUPERFAMILY Calcium ATPase, transduction domain A 276 417 IPR008250 -
Lja1g3247 1313 SFLD Haloacid Dehalogenase 549 1069 - -
Lja1g3247 1313 CDD P-type_ATPase_APLT_Dnf-like 194 1179 - -
Lja1g3247 1313 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 166 1311 - -
Lja1g3247 1313 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 989 1105 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lja1g3247 1313 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 498 588 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lja1g3247 1313 SUPERFAMILY Calcium ATPase, transmembrane domain M 192 1286 IPR023298 -
Lja1g3247 1313 MobiDBLite consensus disorder prediction 1 21 - -
Lja1g3247 1313 Gene3D - 832 1059 IPR023214 -
Lja1g3247 1313 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 572 802 IPR023299 GO:0000166
Lja1g3247 1313 Pfam E1-E2 ATPase 278 523 - -
Lja1g3247 1313 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 192 1294 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Lja1g3247 1313 Pfam Phospholipid-translocating ATPase N-terminal 178 243 IPR032631 -
Lja1g3247 1313 Pfam Cation transport ATPase (P-type) 669 757 - -
Lja1g3247 1313 Pfam Phospholipid-translocating P-type ATPase C-terminal 1047 1287 IPR032630 -
Lja1g3247 1313 SUPERFAMILY HAD-like 552 1064 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3247 Lja-Chr1 40054771 40060443 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3247 155 1296 Primary Pumps ATPases AT5G04930 57.391 0.0 1326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3247 K14802 - gmx:100812459 2108.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3247 1 40054771 40060443 Lja1g3247 1 40054771 40060443 ECH