Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3237 ATGATGGGGAAAATGAATCAGTATTGTGTTGGTGTTCCATTGTTTCTGTGTTTGGTGTTAGCTGTTGAACTTGTCCTAGCAGCAGATTTTAAGCCTACAGATAAAATCCTGTTGAATTGTGGAGGTCCTCCTGATAGTTCTGATACTGATGGCCGTGATTGGACCACTGATAAGGGTTCCAAATTTGGTGCCCTTGGTGGGAATTCCACCACATCATCGGCAGCGACTCAAGACCCTGCTGTCCCCCAGGTTCCTTTCATGACGGCGCGCGTGTTTTTTGCGCCGTATACCTACAGTTTTCCGGTGGCCTCGGGTAGGAAGTTCCTCAGGCTGTACTTTTACTCTGCTTCCTATTCGGGCCTCAATGCATCGGATGCCCTTTTCGGTGTGGAGGCGCAATCCTATACCCTGCTTAGGAACTTCAGCGTTTCTCAGAACACCTTGGCTTTGAATTATGCTTACATTGTGAAGGAATACTCCATCAATGTTGAAGGGGGGACCTTGAATGTGACATTTAGGCCATCTACCAATGCCTCCAATGCCTATGCGTTTGTTAACGGAATTGAGGTTGTGTCCATGCCTGATATTTACTCTTCTACGGATGGAACTACCATGATCGTGGGTACGGATTCAGCTGTCACCATTGACAACAGCACTGTTCTTGAGAATCTTTATAGGTTGAATGTAGGTGGGAATGATATCTCACCCTCCCATGATACCGGCATGTTTAGGTCATGGTCTGATGATATGCCCTACATCTATGGTGCTGGATTGGGAGTTACTGAGCCTGCTGATCCAGAAGTGAAGCTTGAGTATCCTCCGGACACACCGACTTATATTGCCCCGGCTGATGTCTACACCACAGCTAGATCAATGGGCCCGGATGCCAGCATCAACAAGAATTACAACTTAACTTGGATTTTCTCCATTGATTCTGGGTTTTCCTATCTTGTGAGACTTCATTTCTGTGAGGGCTCAACAAATATCACCCTGATTAATCAAAGAGTATTTGATATATTCCTCAAAAATGAAACTGCTCAGGCGGAGGCTGATGTGATTGCCTGGGCAAACTTGTATGACCTTTCACATTCAAATGGGGTCCCAGTTCATAGAGATTTTGTTGTATTTGTTCCCAACGGGGAACCACGGCAGGACTTGTGGCTTGCGCTGCATCCAGATACATCTTCGAAGCCCCAATATTATAATGCAATCTTGAATGGAGTGGAGATATTCAAAATTAATGATACTACAGGCAATCTGGCAGGGACAAATCCTATTCCTCCTCCGCTGCAAGAAAAAATTGATCCATCATTGGCTAGGGCATCTAGCCATGGTAAATCAAGCAGTCATGCGGGAATAATTGCTGGGTGTGCTGTTGGAGGAGTTGTTTTATTGCTTGTGATTGGGCTATTTGCTTTTGCTGCATCCCGTCGCCGCAGGCATGGAAAAGATTCTAGTGCAAGTGAAGGGCCATCTGGCTGGCTTCCACTCTCGCTTTATGGTAATTCACACTCTGCAGCTTCTGCCAAGACCAACACAACAGGAAGTTATGCATCCTCTCTCCCATCAAACCTCTGCCGTCATTTCTCATTTGCTGAAATCAAGTCTGCCACGAAAAACTTTGATGAGGCTTTGCTTCTTGGTGTTGGAGGATTTGGTAAGGTTTATTATGGAGAAGTTGATGGTGGAACGAAAGTTGCAATTAAACGAGGGAATCCACTCTCTGAGCAGGGGGTGCATGAGTTCCAGACTGAGATTGAAATGCTTTCTAAACTCCGTCATCGCCACCTAGTTTCACTCATTGGATACTGTGAAGAAAACACTGAAATGATCCTTGTCTATGATCATATGGCCTATGGAACACTCAGGGAGCACCTTTACAAGACACAGAAACCTCCACTACCATGGAAGCAAAGGCTTGAGATATGCATTGGAGCTGCTCGGGGTTTACACTATCTACATACCGGTGCCAAATACACTATCATCCACCGAGATGTGAAGACCACAAACATTCTACTAGATGAGAAGTGGGTGGCTAAGGTTTCTGATTTTGGATTGTCTAAAACAGGTCCTACATTGGATAATACTCACGTAAGTACTGTAGTAAAGGGTAGTTTCGGGTACCTGGATCCGGAATACTTCAGGAGGCAGCAACTCACCGACAAATCTGATGTGTACTCATTCGGTGTGGTTCTGTTTGAGATCTTGTGCGCTCGCCCGGCTTTGAACCCGTCCCTTGCTAAGGAGCAAGTGAGTCTTGCTGAGTGGGCTTCTCATTGCTACAACAAAGGCATTCTTGACCAAATACTTGATCCTTATCTGAAGGGCAAGATAGCTCCGGAATGCTTTAAGAAGTTTGCTGAGACCGCAATGAAGTGTGTGTCTGACCAGGGCATTGAGAGGCCGTCCATGGGTGATGTCTTGTGGAACCTCGAATTCGCTTTGCAGCTTCAAGAAAGCGCAGAAGAGAGCGGCAACGGGTTTGGTGGAATTCACGGTGAAGATGAGCCATTGTTTGCAGATTCTAAGGGAAAGAAGGATCCTGATGCAATGCCTGGCTATGATGGTAATGTGACTGACTCCAAAAGCAGTGGCATGTCTATGAGCATTGGAGGTAGAAGCTTGGCTAGTGAAGACTCTGATGGGTTAACACCAAGTGCTGTGTTCTCTCAGATCATGAATCCAAAGGGGCGTTAA 2697 0.4601 MMGKMNQYCVGVPLFLCLVLAVELVLAADFKPTDKILLNCGGPPDSSDTDGRDWTTDKGSKFGALGGNSTTSSAATQDPAVPQVPFMTARVFFAPYTYSFPVASGRKFLRLYFYSASYSGLNASDALFGVEAQSYTLLRNFSVSQNTLALNYAYIVKEYSINVEGGTLNVTFRPSTNASNAYAFVNGIEVVSMPDIYSSTDGTTMIVGTDSAVTIDNSTVLENLYRLNVGGNDISPSHDTGMFRSWSDDMPYIYGAGLGVTEPADPEVKLEYPPDTPTYIAPADVYTTARSMGPDASINKNYNLTWIFSIDSGFSYLVRLHFCEGSTNITLINQRVFDIFLKNETAQAEADVIAWANLYDLSHSNGVPVHRDFVVFVPNGEPRQDLWLALHPDTSSKPQYYNAILNGVEIFKINDTTGNLAGTNPIPPPLQEKIDPSLARASSHGKSSSHAGIIAGCAVGGVVLLLVIGLFAFAASRRRRHGKDSSASEGPSGWLPLSLYGNSHSAASAKTNTTGSYASSLPSNLCRHFSFAEIKSATKNFDEALLLGVGGFGKVYYGEVDGGTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENTEMILVYDHMAYGTLREHLYKTQKPPLPWKQRLEICIGAARGLHYLHTGAKYTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTLDNTHVSTVVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEILCARPALNPSLAKEQVSLAEWASHCYNKGILDQILDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLEFALQLQESAEESGNGFGGIHGEDEPLFADSKGKKDPDAMPGYDGNVTDSKSSGMSMSIGGRSLASEDSDGLTPSAVFSQIMNPKGR* 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3237 898 MobiDBLite consensus disorder prediction 836 850 - -
Lja1g3237 898 ProSiteProfiles Protein kinase domain profile. 541 814 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g3237 898 PANTHER OS07G0166700 PROTEIN 21 850 IPR045272 GO:0004714|GO:0006468
Lja1g3237 898 MobiDBLite consensus disorder prediction 824 898 - -
Lja1g3237 898 Gene3D Transferase(Phosphotransferase) domain 1 617 827 - -
Lja1g3237 898 Pfam Malectin-like domain 38 413 IPR024788 -
Lja1g3237 898 MobiDBLite consensus disorder prediction 857 891 - -
Lja1g3237 898 PANTHER - 21 850 - -
Lja1g3237 898 Gene3D Phosphorylase Kinase; domain 1 502 616 - -
Lja1g3237 898 ProSitePatterns Protein kinases ATP-binding region signature. 547 569 IPR017441 GO:0005524
Lja1g3237 898 SMART serkin_6 541 814 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g3237 898 Gene3D - 36 194 - -
Lja1g3237 898 Gene3D - 220 414 - -
Lja1g3237 898 CDD STKc_IRAK 547 812 - -
Lja1g3237 898 SUPERFAMILY Protein kinase-like (PK-like) 515 813 IPR011009 -
Lja1g3237 898 ProSitePatterns Serine/Threonine protein kinases active-site signature. 661 673 IPR008271 GO:0004672|GO:0006468
Lja1g3237 898 Pfam Protein tyrosine and serine/threonine kinase 547 808 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3237 Lja-Chr1 39968399 39972072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3237 19 898 Receptor kinase-like Gene Family AT3G51550 74.237 0.0 1316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lja1g3237 Malectin_like 1.8e-35 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3237 - - gmx:100499644 1514.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3237 1 39968399 39972072 Lja1g3237 1 39968399 39972072 ECH