Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3229 ATGCTAACCCTCATTCACAATGCTATTCCTTCTTCGTTCTCAGTTTCTCCCTTTCATGCCAATTATCACCTTTCCTCTCAAACTCAGTTATTGGTTCCTTCCAATCTTAATTGCCCCTTTAGTACTACAGCAACAAGAAAGTTTAGAACTTTTCAACTCAAGGCTGGATTTTGGGAGTCAATTAAATCTGGGTTTACGAAGACTAACACAACACAGGTCATCGATCCACAGTCCATAGATGAAGAAGATGAAGAACCTCTACCTCAGGAGTTTGTCCTTGTTAAAAAGACAGAACTTGATGGAACAGTTGAGCAAATAATATTCTCTTCGGGTGGAGATGTTGATGTTTATGATCTTCAAGCCCTCTGTGACAAGGTAGGGTGGCCGCGTAGGCCATTGTCAAAATTAGCTGCTGCTTTGAAAAATAGCTATATAGTAGCCTCTCTGCATTCTATACGAAAATCACCTGGGTCAGAGGGGAATGAACAAAAGAGATTAATTGGCATGGCCCGTGCTACGTCTGACCATGCCTTCAATGCCACAATTTGGGATGTTGTAGTTGATCCTGGCTACCAGGGCCAAGGTCTTGGTAAAGCTCTTGTAGAGAAACTGATTCGAACTCTTTTGCAAAGGGACATTGGTAATATTACTTTGTTTGCAGATGGTCAAGTTGTGGAATTTTATGGCAATTTAGGTTTTCAAGCTGACCCAGAGGGCATAAAAGGCATGTTTTGGTACCCAAATAACTAA 750 0.4133 MLTLIHNAIPSSFSVSPFHANYHLSSQTQLLVPSNLNCPFSTTATRKFRTFQLKAGFWESIKSGFTKTNTTQVIDPQSIDEEDEEPLPQEFVLVKKTELDGTVEQIIFSSGGDVDVYDLQALCDKVGWPRRPLSKLAAALKNSYIVASLHSIRKSPGSEGNEQKRLIGMARATSDHAFNATIWDVVVDPGYQGQGLGKALVEKLIRTLLQRDIGNITLFADGQVVEFYGNLGFQADPEGIKGMFWYPNN* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3229 249 CDD NAT_SF 162 218 - -
Lja1g3229 249 PANTHER ACETYLTRANSFERASE NSI 11 248 - -
Lja1g3229 249 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 106 249 IPR000182 GO:0016407
Lja1g3229 249 PANTHER ACYL-COA N-ACYLTRANSFERASE 11 248 IPR045039 GO:0008080
Lja1g3229 249 Gene3D - 110 246 - -
Lja1g3229 249 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 115 238 IPR016181 -
Lja1g3229 249 Pfam Acetyltransferase (GNAT) family 115 233 IPR000182 GO:0016407
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3229 Lja-Chr1 39894854 39899481 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lja1g3229 Acetyltransf_1 6.5e-14 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3229 K22450 - gmx:100799333 427.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3229 1 39894854 39899481 Lja1g3229 1 39894854 39899481 ECH