Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lja1g3222 | ATGAACCAGAATATCCAGAAATCAAATGTGCCAAAGACTGAGAGATCATCCATTGAAGGTTCTGTAAGGACAAGTTCCTCGGGAGAGGAAGATCACTCAGGTGAGATGGAAACCGAATGGGTCGAACAGGATGAACCAGGAGTATATATCACCATTAGAGCGCTTCCAGGTGGAGCTAGAGAACTTAGGCGTGTCCAGTTCAGCTGCGAGAAATTTGGAGAAGTGCACGCCAGATTGTGGTGGGAAGAGAACCGTGCTAGGATACAAGAACAATACTTGTGA | 282 | 0.4645 | MNQNIQKSNVPKTERSSIEGSVRTSSSGEEDHSGEMETEWVEQDEPGVYITIRALPGGARELRRVQFSCEKFGEVHARLWWEENRARIQEQYL* | 94 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lja1g3222 | 93 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Lja1g3222 | 93 | Pfam | Transcription factor regulating root and shoot growth via Pin3 | 37 | 92 | IPR013591 | - | |
Lja1g3222 | 93 | ProSiteProfiles | BRX domain profile. | 38 | 93 | IPR013591 | - | |
Lja1g3222 | 93 | MobiDBLite | consensus disorder prediction | 1 | 43 | - | - | |
Lja1g3222 | 93 | PANTHER | PROTEIN BREVIS RADIX-LIKE 3 | 8 | 93 | - | - | |
Lja1g3222 | 93 | PANTHER | PROTEIN BREVIS RADIX-LIKE 1 | 8 | 93 | IPR044532 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lja1g3222 | Lja-Chr1 | 39804666 | 39806778 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lja1g3222 | 21 | 93 | Major Intrinsic Protein MIP | AT1G31880 | 60.256 | 2.29e-27 | 100 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lja1g3222 | - | - | gmx:100805480 | 150.984 |