Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3222 ATGAACCAGAATATCCAGAAATCAAATGTGCCAAAGACTGAGAGATCATCCATTGAAGGTTCTGTAAGGACAAGTTCCTCGGGAGAGGAAGATCACTCAGGTGAGATGGAAACCGAATGGGTCGAACAGGATGAACCAGGAGTATATATCACCATTAGAGCGCTTCCAGGTGGAGCTAGAGAACTTAGGCGTGTCCAGTTCAGCTGCGAGAAATTTGGAGAAGTGCACGCCAGATTGTGGTGGGAAGAGAACCGTGCTAGGATACAAGAACAATACTTGTGA 282 0.4645 MNQNIQKSNVPKTERSSIEGSVRTSSSGEEDHSGEMETEWVEQDEPGVYITIRALPGGARELRRVQFSCEKFGEVHARLWWEENRARIQEQYL* 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3222 93 MobiDBLite consensus disorder prediction 1 24 - -
Lja1g3222 93 Pfam Transcription factor regulating root and shoot growth via Pin3 37 92 IPR013591 -
Lja1g3222 93 ProSiteProfiles BRX domain profile. 38 93 IPR013591 -
Lja1g3222 93 MobiDBLite consensus disorder prediction 1 43 - -
Lja1g3222 93 PANTHER PROTEIN BREVIS RADIX-LIKE 3 8 93 - -
Lja1g3222 93 PANTHER PROTEIN BREVIS RADIX-LIKE 1 8 93 IPR044532 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3222 Lja-Chr1 39804666 39806778 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3222 21 93 Major Intrinsic Protein MIP AT1G31880 60.256 2.29e-27 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3222 - - gmx:100805480 150.984