Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3185 ATGGCTTCCATCCGAAATGGCGCCCAAAGAGGAAGCGCCAAGTTCGATCGCCCCCTCAAGCCTCGTCCCCGCCCTTCCTCGCCGGGATCCGCCGTCCGCCGCCCCAACCGCAACGACGCCGTGCTTGGAAGAGTTCGAGTGGCCGTAAGATTGAGACCAAGAAACGCTGAAGAAATGATGGCTGATGCTGATTTTGCTGACTGTGTTGAAGTACAGCCTGAGCTTAAAAGACTGAAACTTCGCAGGAATAACTGGGATTCAGACACTTATGAGTTTGATGAGGTGCTTACCGAATATGCATCACAGAAACGTGTCTATGAAGTTGTGGCTAAGCCAGTTGTGGAGAGTGTTCTTGATGGTTATAATGGGACTGTGATGGCTTATGGTCAAACTGGAACGGGGAAAACTTTTACTCTTGGACGACTGGGGGAAGGAGACACCTCTGATCGTGGGATTATGGTGCGTTCCATGGAGGATATTCTTGCTGACTTGTCTCCAGATACTGATTCTATTACTGTCTCATATCTGCAGCTTTACATGGAAACTCTCCAGGACTTGCTTAATCCAGCAAATGATAACATTCCTATTGTGGATGATCCAAGAACTGGCGATGTATCCTTGCCTGGGGCAACTATTGTAGAAATCAGGGACCAACAGAGTTTTTTGGAGTTGTTAAGTGTAGGAGAAGCTAATCGAATTGCTGCTAATACAAAATTGAATACTGAATCTTCTCGTAGTCACGCTATTCTGATGGTTCACATTAAAAGGTCTGTCATAGAAAATGAAGATATTGTATCTAGTCAAAATGGCGATACCTCTCACTTGATTAAACCTTCAAAACCACTTGTTCGGAAGAGCAAGTTGGTTGTGGTAGACCTAGCAGGTTCAGAGCGTGTCCATAAGTCAGGAAGCGAGGGGCACATGCTAGAGGAAGCTAAATCTATCAACCTTTCACTTAGTTCACTGGGAAAATGCATCAATTCTCTAGCAGAGAACAGTGCTCATGTTCCATTTCGTGATTCAAAGCTTACACGGATGCTCCGAGATTCTTTTGGCGGTACTGCTAGGACTTCATTGATTGTGACCATTGGCCCATCCCCACGTCATCGAGGAGAGACTTCTAGTACCATATTGTTTGGTCAAAGGGCTATGAAAGTTGAGAATATGCTCAAAATAAAGGAGGAGTTTGATTATAAAAGCTTGTCTCGAAAGCTTGAAGTACAATTAGATAAGCTTATTGCAGAAAATGAAAGGCAGCAGAAAGCTTTTGAGGATGAAGTTGAAAAAATAAATTTGGAGGCACAATGTCGTATTGCTGAGGTTGAAAGAAACTTTGCAGATGGTTTAGAGAAAGAGAGATTGAAATGCCAGATGGAGTATATGGAATTGGTAAAGGAGCTGGAGCAGAAGTTGGTGTTGAATCAAGGAAGAAATGACCGAAATAGTTTTGTGGCTGATAGTGGAGAGGGGCCTGCACAACCTTCTCCAAATGAACTTGCCGAGGTCAAAATGCTGCTTGAAACTGAAAGCAAGCGGAGAAAGGAGGCTGAAGAAGAGGTAAAACGTCTAAAAAATCAGCTGGGGATATATACACAAGCAGACGCAGGAGGGGATTTGGAGACTATAAAGCTTCACAACATGCTGGAGGATGAAGTAAATCAGAAAAAGAAACTTGAAGATGAAATTATAATATTAAGAAGTCAATTATTGCAATTGACCTTTGAAGCTGACCAGATGAGAAGGTGTTTGGAAAGTGGAAGCTCTGGGAGCACATTTTCCGCCATGGATTCCTCCATGACACAGGTTAGGCATTCCCAATTCAAAGACACTGGGAATGGTCAGAAGTCATCTGTTGCTACACTCTTTGAGCAAGTTGGATTGCAAAAGATTTTATCATTGCTGGAGTCGGACGATGCCAATGTACGAATTCATGCTGTGAAAGTGGTAGCCAACCTTGCAGCTGAAGAGGCTAATCAGAAGAGAATTGTTGAATCTGGCGGTCTTACTTCCTTGCTGATGCTTCTTCGAAGATACGAGGATGAAACTGTTCGGAGAGTAGCTGCTGGGGCAATTGCCAATCTTGCTATGAATGAAGCAAATCAAGAACTCATAATGGCTGAAGGAGGAATTACTCTGTTATCAATGACTGCATCTGATGCTGAAGATCCACAAACTCTTCGAATGGTTGCTGGGGCAATTGCTAACCTATGTGGAAATGATAAAATATTGATGACTCTAAGATCTCAGGGAGGTATCAAGGCTTTACTTGGAATTGTAAGATGTGGGCATCCAGATGTTCTCTCCCAAGTTGCACGGGGAATTGCTAACTTCGCAAAATGCGAGTCTCGAGCTTCTAATCAAGGGATAAAAAGTGGCAGATCTATTTTGATAGAAGATGGTGCACTTCCGTGGATAGTACAAAATGCTAACAATGAAGCTGCACCAATCAGGCGTCACATTGAGCTTGCACTGTGCCACTTGGCCCAGCATGAAGTGAATGCGAAAGACATGATTAGTGGAGGTGCCCTCTGGGAGCTTGTCAGGATTTCACGGGATTGTTCACGAGAGGACATACGGAGTCTTGCGCGTCGGACTCTCAGTTCTATCCCTCCATTCAAAGCAGAACTCCGGCGGCTGCGTGTAGAATATTGA 2652 0.4416 MASIRNGAQRGSAKFDRPLKPRPRPSSPGSAVRRPNRNDAVLGRVRVAVRLRPRNAEEMMADADFADCVEVQPELKRLKLRRNNWDSDTYEFDEVLTEYASQKRVYEVVAKPVVESVLDGYNGTVMAYGQTGTGKTFTLGRLGEGDTSDRGIMVRSMEDILADLSPDTDSITVSYLQLYMETLQDLLNPANDNIPIVDDPRTGDVSLPGATIVEIRDQQSFLELLSVGEANRIAANTKLNTESSRSHAILMVHIKRSVIENEDIVSSQNGDTSHLIKPSKPLVRKSKLVVVDLAGSERVHKSGSEGHMLEEAKSINLSLSSLGKCINSLAENSAHVPFRDSKLTRMLRDSFGGTARTSLIVTIGPSPRHRGETSSTILFGQRAMKVENMLKIKEEFDYKSLSRKLEVQLDKLIAENERQQKAFEDEVEKINLEAQCRIAEVERNFADGLEKERLKCQMEYMELVKELEQKLVLNQGRNDRNSFVADSGEGPAQPSPNELAEVKMLLETESKRRKEAEEEVKRLKNQLGIYTQADAGGDLETIKLHNMLEDEVNQKKKLEDEIIILRSQLLQLTFEADQMRRCLESGSSGSTFSAMDSSMTQVRHSQFKDTGNGQKSSVATLFEQVGLQKILSLLESDDANVRIHAVKVVANLAAEEANQKRIVESGGLTSLLMLLRRYEDETVRRVAAGAIANLAMNEANQELIMAEGGITLLSMTASDAEDPQTLRMVAGAIANLCGNDKILMTLRSQGGIKALLGIVRCGHPDVLSQVARGIANFAKCESRASNQGIKSGRSILIEDGALPWIVQNANNEAAPIRRHIELALCHLAQHEVNAKDMISGGALWELVRISRDCSREDIRSLARRTLSSIPPFKAELRRLRVEY* 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3185 883 PRINTS Kinesin heavy chain signature 120 141 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja1g3185 883 PRINTS Kinesin heavy chain signature 287 305 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja1g3185 883 PRINTS Kinesin heavy chain signature 336 357 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja1g3185 883 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 666 709 IPR000225 GO:0005515
Lja1g3185 883 Pfam Kinesin motor domain 50 386 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja1g3185 883 Gene3D - 496 869 IPR011989 -
Lja1g3185 883 Coils Coil 402 444 - -
Lja1g3185 883 ProSiteProfiles Kinesin motor domain profile. 44 386 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja1g3185 883 SMART arm_5 697 738 IPR000225 GO:0005515
Lja1g3185 883 SMART arm_5 655 696 IPR000225 GO:0005515
Lja1g3185 883 SMART arm_5 739 779 IPR000225 GO:0005515
Lja1g3185 883 SMART arm_5 615 654 IPR000225 GO:0005515
Lja1g3185 883 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 625 667 IPR000225 GO:0005515
Lja1g3185 883 Coils Coil 548 575 - -
Lja1g3185 883 PANTHER KINESIN-RELATED 28 873 IPR027640 GO:0003777|GO:0007018
Lja1g3185 883 Coils Coil 499 533 - -
Lja1g3185 883 MobiDBLite consensus disorder prediction 1 38 - -
Lja1g3185 883 SUPERFAMILY ARM repeat 619 869 IPR016024 -
Lja1g3185 883 Pfam Armadillo/beta-catenin-like repeat 658 695 IPR000225 GO:0005515
Lja1g3185 883 PANTHER KINESIN-LIKE PROTEIN 28 873 IPR033291 GO:0008017|GO:0032886|GO:0048364
Lja1g3185 883 SMART kinesin_4 42 394 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja1g3185 883 ProSitePatterns Kinesin motor domain signature. 286 297 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lja1g3185 883 CDD KISc 44 384 - -
Lja1g3185 883 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 421 IPR027417 -
Lja1g3185 883 Gene3D Kinesin motor domain 36 416 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3185 Lja-Chr1 39306909 39321095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3185 33 433 Calmodulin-binding Proteins AT5G65930 33.014 3.09e-46 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3185 - K10396 gmx:100789455 1507.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3185 1 39306909 39321095 Lja1g3185 1 39306909 39321095 ECH