Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3176 ATGGATCTGCTACTCATTGTCTTAGTCTGTGCAAGCACTCTAACTTTCTTCATCTTTAGATGTTTGTACAATCAAACCAAAAGTTCTTCCAATCTTCCACCAGGGCCACGCCCCCTTCCAATAATTGGAAACATTTTAGAACTTGGTAGGAATCCACCCATAGCACTCTCCAAACTCTCCAAAATTTATGGACCCATCATGACATTGAAACTAGGCTCCATAACCACCATAGTCATCTCTTCTCCACAATTAGCCAAACAAGTGCTGCAAGAGAATAGCCAAGCATTTTCTAGCAGGATAACTCCACATGCTGTTCAAATATATGACCATCACAAATTTGCAATCACCTGGCTTCCCCCAACAGCTCAGTGGAGGAACCAAAGAAGAGCTTGTGCCACAAAAATATTTTCCCCAAAAATGCTTGACTCCACAAAAGTTGTCCGTCAACAAAAGCTACAAGAATTATTGGATTATGTAAAGGACAAAAGCTTGAAATGTGAGGTTTTGAATCTTGGTGAGGCTGTTTTCACGCCTGTACTTAATTCATTTTCAAACACTTTCTTCTCTTTGGATTTGTCTCACTCTGCATCTGATGAGAAGTCTCAAGAGTTTAAGAACATTATTACGGGTGCAATGGAAGATGCTGGAAGGCCAAACGTTGTAGACTTTTTTCCCATTCTTGGTCCACTTGACCCTCAAGGTTTTCATGCTAGGATGTCCATTTCTTTCATCAAGTTGCGTAAAATTATTGATGCAATTATTGAAGAAAGAATGTGCTCAAGAGTTTCAAAAACTGATTCCGGATTCGAGGTGGCCAATGATGTGTTAGATTCACTTCTTAGCAATGTTGGAGGTAGTTCTCAGCTGAGCCGCGAAGAGATGTTACATCTATTTATGGATTTATTTATTGCTGGGATCGATACAACAGTCGTCACAGTTGAATGGGCAATGTCAGAGCTATTGCGTAACCCTGATAAATTAGAAAAAACAAAAGATGAGTTGCGTCAAGCAATTGGTGAGGATGCAACACTTGTAGAATCACACATATTAAAGTTGCCTTATTTACAAGCAGTTGTAAAGGAAACTTTACGCTTGCATCCACCAGCTCCATTTCTGGTACCACGCAAGTGTGATGAAGATGTCAGCATATCTGGCTTCCTAGTGCCAAAAGATGCACAAATCTTAGTCAACCTATGGGCCATGGGGCGAGATCCAATCATTTGGGAAAATCCAAATATGTTTGTGCCTGAAAGATTTTTGGATTGTAAAATTGATTTTAAGGGTCACAATTTTGAGCTTATACCCTTTGGGGCAGGAAAAAGGATGTGTCCTGGATTGCCATTAGCTTATAGGTCAGTGCATTTATTGTTGGCATCTCTTTTGCACTACTTTGATTGGAAGTTAGCTGATGGATTGACACCTGAACACATAAATATGGAGGAGCGTTTTGCTGGATTATCCTTAAAGAAGGCCCAAGCTCTTCGAGTTCAAGCTATTTCAATCAAGCAATAG 1512 0.4008 MDLLLIVLVCASTLTFFIFRCLYNQTKSSSNLPPGPRPLPIIGNILELGRNPPIALSKLSKIYGPIMTLKLGSITTIVISSPQLAKQVLQENSQAFSSRITPHAVQIYDHHKFAITWLPPTAQWRNQRRACATKIFSPKMLDSTKVVRQQKLQELLDYVKDKSLKCEVLNLGEAVFTPVLNSFSNTFFSLDLSHSASDEKSQEFKNIITGAMEDAGRPNVVDFFPILGPLDPQGFHARMSISFIKLRKIIDAIIEERMCSRVSKTDSGFEVANDVLDSLLSNVGGSSQLSREEMLHLFMDLFIAGIDTTVVTVEWAMSELLRNPDKLEKTKDELRQAIGEDATLVESHILKLPYLQAVVKETLRLHPPAPFLVPRKCDEDVSISGFLVPKDAQILVNLWAMGRDPIIWENPNMFVPERFLDCKIDFKGHNFELIPFGAGKRMCPGLPLAYRSVHLLLASLLHYFDWKLADGLTPEHINMEERFAGLSLKKAQALRVQAISIKQ* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3176 503 Pfam Cytochrome P450 33 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3176 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Lja1g3176 503 Gene3D Cytochrome P450 18 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3176 503 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3176 503 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3176 503 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3176 503 PRINTS P450 superfamily signature 443 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3176 503 PANTHER CYTOCHROME P450 FAMILY PROTEIN 3 502 - -
Lja1g3176 503 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 3 502 - -
Lja1g3176 503 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3176 503 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3176 503 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3176 503 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3176 503 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3176 503 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3176 503 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3176 503 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3176 503 SUPERFAMILY Cytochrome P450 33 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3176 Lja-Chr1 39043142 39047955 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3176 5 503 Cytochrome P450 AT2G45550 45.079 3.70e-156 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3176 - - gmx:100809461 652.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3176 1 39043142 39047955 Lja1g3176 1 39043142 39047955 ECH