Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3172 ATGGATATGCTAGTGATTACCTTAGTTTGTGCAAGCACTCTTACCTTCTTCATCCTTAGATTACTATACAATCAAACCCAAAATTCCTCCAAGCTTCCACCAGGGCCACGCCCATATCCTATCATAGGAAACATCTTAGAACTTGGTACAAATCCACACATATCACTCACCAAACTCTCAAAGATTTATGGACCCATCATGACACTGAAACTAGGCACCATAACAACCATAGTCATCTCTTCTCCACAATTAGCCAAACAAGTGTTACAAGAAAATGGCCAAACCTTTTCTAGTAGGATAGTCTCACATGCAGTTCAAGCAGTTGAACATCAAAAATGCTCAGCTGTGTGGCTTCCCCCATTAGCTAAGTGGAGGAACCTTAAAAGAGTTTGTGCCACAAAAGTATTCTCCACACAAATGCTTGACTCCACAAAAGTTCTTCGTCAAGAAAAGCTGAAAGAGTTGTTAGATTTTGTAAAGGAGAAAAGCAACAAAGGTGAGGCTTTGGATCTTGGTGAGGCTGTTTTCTCAACTGTCCTCAATTCAATTTCAAACACTTTCTTCTCTGTGGATTTGACTCACTCTACATGTGATGAAAAGTCTCAAGAGTTTAAGAACATTATCTGGAAAATCATGGAATATGCTGGAAAACCCAACGTTGCAGATTTCTTTCCTATTCTTCGTCCACTTGATCCACAGGGTGTTCATGCCAAGATGTCCCATTATTTCATGAAATTATTGAAGATTTTTGATGGTATTATTGAAGAAAGAATGTATTCAAGAACTGAGTCCAAGGTGTGCAATGATGTGTTAGATTCACTTCTTTGCAATAATGTTGAAGAAACAAGTTCTCCGCTGAGCTGCAAAGAGATATTGCATTTGTTTTTGGATTTATTTGTTGCTGGGATTGACACAACATCAAGCACGGTTGAATGGGCGATGGCAGAGCTACTGCGTAACCCTAATAAATTAGCAAAAGCAAAAGAAGAGTTGTGTGAAGTAGTTGGTGAAGATGCACCACTTGAAGAATCACACATCTCAAAGCTACCTTACTTACAAGCAGTAGTGAAGGAAACTTTTCGCTTGCACCCACCAGCTCCGTTTCTGCTACCACATAAGTGTGATGAAGTGGTAAACATCTCTGGCTTCCAAGTGCCAAAAGATGCTCAAGTATTTGTCAATGTGTGGGCCATGGGACGAGATCCAACCATTTGGGAGAATCCAAATATGTTTGAGCCTGAAAGGTTTTTGAAGTGTGAGATTAATTTCAAAGGTAATAATTTTGAGTTAATACCATTTGGGGCAGGTAAAAGGATATGCCCTGGATTACCATTAGCTCATAGGTCAGTGCATTTAATGGTGGCCTTCCTGCTGCACAACTTTGAATGGAAGCTAGCTGATGGGTTAACACCAGAAAACATGAATATGGTAGAGCATTTCGGTATTACCATAGTGTGTGCGGGTACTCTCACCTTCTTCATCCTTAGATTATTATTCAATCAAACCCAATACACCATCAAGCTTCCACCAGGGCCAAGCCTCTTTCATATCATAAGAAACATCTTAGAACTTAGTAGAAATCCACACATAGCAATCACCAAACTCTCCAAAATTTATGGACCCATCATAACATTGAAACTAGGCAGCAGAATCACCATAGTGATATCTTCTCCTCAATTAGCCAAACAAGTGTTGCAAGAGAATAGCCAAGCCTTTTCTAGCAGGACAGTTCCATATGCTTCTCGTGTGTTTGACCAACATAAAAACTCACTCACGTTTCTGCCCCTATCAGCTGAGTGGAGGAACCTTAGAAGACATTGTGCCACAATATTCTCCACACAGATGCTTGACTCCACAAAAGTTGTTCGTCAACAAAAGCTGAAAGAGTTGTTGGATTTTATAAAGGAGAAAAGCTTGAATGGTGAGGATTTAGATCTTGGTGAGGCTGTTTTTACAACTGTACTCAATTCAATTTCAAACACTTTCTTCTCTAAAGATTTGTCTCACTCTACATCTGATGAAAAGTCTCAAGAGTTTAAGAACATTATTGGGGGTGTCATGGAAGATGGTGGAAGGCCAAACATTGTGGACTTTTTTCCCATTCTCGCTCCACTTGATCCTCAAGGTGTTCAAGCTAGGATGTCCATTTACTTCATCAAGTTGTTTAAAATTATTGATGGAATTATTGAAGAAAGAATGTGTTCCAGAGATTCAAAAATTGATTCCGGATCTGAGGTGGGCAATGATGTGTTAGATTCAATTATTAGCAACGTTGGAGCTACTTCTCAGCTGAGCCGCAATGAGATTAGACATCTGTTTCTGGATTTATTTATTGCTGGGATCGAGACAACCGTCGTCACTGTTGAATGGGTGATGGCAGAGTTATTGCGTAACCCTGATAAATTAGAAAAAGTAAGAGAAGAGTTGTGTCAAGCAATTGAAGAGGATGCAATACTTGAAGAATCACACATCTCAAAATTGCCTTATTTACAAGCAGTTGTAAAAGAAACTTTTCGCTTGCATCCACCAGGTCCATTTCTTGTACCACGCAAGTGTGATGAAGATGCATGCATAGCTGGCTTCCTAGTGCCAAAAGATGCACAAGTCTTAGTCAATGTGTGGGCCATGGGACGAGATCCAACCATTTGGGAAAAACCAAATATATTCTTGCCTGAAAGATTTTTAAATTGTGAGATTAATTTTAAAGGTCAGAATTTTGAGCTTATACCCTTTGGGGCAGGCAAAAGGATGTGCCCTGGATTGCCATTAGCTCATAGGTCAGTGCATTTAATAGTGGCATCCCTTCTGCACAACTTTGAATGGAAGCTACCTGATGGGCTAACATCTGAACACATAAACATGAAGGAGGATTTTGGATTATCCTTAAAGAGAGCCCAACCTCTTCGACTTCAAGCTATTTCAATCAAGCTCTCTTAA 2937 0.398 MDMLVITLVCASTLTFFILRLLYNQTQNSSKLPPGPRPYPIIGNILELGTNPHISLTKLSKIYGPIMTLKLGTITTIVISSPQLAKQVLQENGQTFSSRIVSHAVQAVEHQKCSAVWLPPLAKWRNLKRVCATKVFSTQMLDSTKVLRQEKLKELLDFVKEKSNKGEALDLGEAVFSTVLNSISNTFFSVDLTHSTCDEKSQEFKNIIWKIMEYAGKPNVADFFPILRPLDPQGVHAKMSHYFMKLLKIFDGIIEERMYSRTESKVCNDVLDSLLCNNVEETSSPLSCKEILHLFLDLFVAGIDTTSSTVEWAMAELLRNPNKLAKAKEELCEVVGEDAPLEESHISKLPYLQAVVKETFRLHPPAPFLLPHKCDEVVNISGFQVPKDAQVFVNVWAMGRDPTIWENPNMFEPERFLKCEINFKGNNFELIPFGAGKRICPGLPLAHRSVHLMVAFLLHNFEWKLADGLTPENMNMVEHFGITIVCAGTLTFFILRLLFNQTQYTIKLPPGPSLFHIIRNILELSRNPHIAITKLSKIYGPIITLKLGSRITIVISSPQLAKQVLQENSQAFSSRTVPYASRVFDQHKNSLTFLPLSAEWRNLRRHCATIFSTQMLDSTKVVRQQKLKELLDFIKEKSLNGEDLDLGEAVFTTVLNSISNTFFSKDLSHSTSDEKSQEFKNIIGGVMEDGGRPNIVDFFPILAPLDPQGVQARMSIYFIKLFKIIDGIIEERMCSRDSKIDSGSEVGNDVLDSIISNVGATSQLSRNEIRHLFLDLFIAGIETTVVTVEWVMAELLRNPDKLEKVREELCQAIEEDAILEESHISKLPYLQAVVKETFRLHPPGPFLVPRKCDEDACIAGFLVPKDAQVLVNVWAMGRDPTIWEKPNIFLPERFLNCEINFKGQNFELIPFGAGKRMCPGLPLAHRSVHLIVASLLHNFEWKLPDGLTSEHINMKEDFGLSLKRAQPLRLQAISIKLS* 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3172 978 PRINTS P450 superfamily signature 832 843 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3172 978 PRINTS P450 superfamily signature 909 918 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3172 978 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3172 978 PRINTS P450 superfamily signature 918 929 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3172 978 PANTHER CYTOCHROME P450 FAMILY PROTEIN 490 976 - -
Lja1g3172 978 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 911 920 IPR017972 GO:0005506|GO:0016705
Lja1g3172 978 SUPERFAMILY Cytochrome P450 509 972 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3172 978 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 490 976 - -
Lja1g3172 978 SUPERFAMILY Cytochrome P450 33 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3172 978 Gene3D Cytochrome P450 494 976 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3172 978 Gene3D Cytochrome P450 18 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3172 978 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3172 978 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3172 978 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3172 978 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3172 978 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3172 978 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3172 978 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3172 978 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3172 978 Pfam Cytochrome P450 33 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3172 978 Pfam Cytochrome P450 509 963 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3172 978 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Lja1g3172 978 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 4 487 - -
Lja1g3172 978 PANTHER CYTOCHROME P450 FAMILY PROTEIN 4 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3172 Lja-Chr1 38946243 38965057 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3172 508 976 Cytochrome P450 AT2G45550 45.975 8.10e-143 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3172 - - han:110934093 877.47