Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3171 ATGGATCTGCCTCTGGTTACCCTAGTGTTTGCAAGTATTCTCACTTTCTTTATTCTTAAATTGTTATACAACCAAACCCAAAATTCTACCAATCTTCCACCAGGGCCACGCCCCTTTCCTATCATAGGAAACATCTTAGAACTTGGAAGAAATCCACACATAGCACTCACCAAACTCTCAAAGATTTATGGACCCATCATGACATTGAAACTAGGCACCATAACCACCATAGTCATCTCTTCTCCACAATTAGCCAAACAAGTGTTGCAAGAGCATGGCCAAATCTTTTCTAGTAGGACAATCCCTCATTCAGCTCAAGTATATGACAATCACAAAATCTCAATTGCGTGGCTTCCAACAAATGCTAAGTGGAGGAAGCTTAGAAAAGTTTGTGCCACTAAAGTATTTTCCCCACAAGTGCTTGACTCCACAAAAGTCCTTCGTCAACAAAAGCTGAAAGAATTGTTGGATTTTGTAAAGGAGAAAAGCAGCAAAGGTGAGCCTTTGGATCTTAGTGAGGCTATTTTCTCAACTGTCCTCAATTCAATTTCAAACACTCTCTTCTCTATGGATTTGTCTCACACTACATCTGATGAAAAGTCTCGAGAGTTTAAGAGTATTATTGAGGGCGCCATGGGGGATGCTGGAAAGCCAAACGTTGCGGATTTCTTTCCCATTCTTCGTCCAATTGACCCACAAGGTCTTCATGCAAGGATGACCAGCTATTTTGTGAAGTTAGCTAAGATTGTTGATGGAATTATTGAAGAAAGAATGTGTTCAAGAGCTGATTCTAAGATTTCCAATGATGTGCTAGATTCACTTCTTAGTGAAATTGAAGAAACAAGTTCTCAGTTGAGCCGCAAAGAAATACTGCAATTATTTCTGGATTTATTTATTGGTGGGATTGACACAACATCAAGCACGGTTGAATGGGCGATGGCAGAGCTACTGCGCAATCCTAATAAATTAACAAAAGCAAAAGAAGAGTTGTATGAAATAATTGGTGAAGATGCAACACTTGAAGAATCACACATCTCAAAGCTACCTTACTTACAAGCAGTGGTGAAGGAAACTCTTCGCTTGCACCCTGCAGCTGCATTTCTAGTACCACATAAGTGTGATGAAGTCGTGAACATATCTGGCTTCCAAGTGCCAAAAAATGCTCAGGTATTGGTCAATGTGTGGGCCATGGGACGGGATCCAACCATTTGGGAGAATCCAAACATGTTTGAGCCTGAAAGATTTTTGAAATGTGAGATTAATTTCAAAGGTAATAATTTTGAGTTAATACCATTTGGGGCAGGTAAAAGGATATGCCCTGGATTACCATTAGCTCATAGGTCAGTGCATTTAATGGTGGCCTTCCTGCTACACAACTTTGAATGGAAGCTAGCTGATGGGTTAACACCAGAAAACATGAATATGGTAGAGCATTTCGGGTTAACCTTAAAGAAGATCCAGCCACTTCGAGTTCAAGCTATTTCAGTCAAGGACAATTAA 1500 0.4013 MDLPLVTLVFASILTFFILKLLYNQTQNSTNLPPGPRPFPIIGNILELGRNPHIALTKLSKIYGPIMTLKLGTITTIVISSPQLAKQVLQEHGQIFSSRTIPHSAQVYDNHKISIAWLPTNAKWRKLRKVCATKVFSPQVLDSTKVLRQQKLKELLDFVKEKSSKGEPLDLSEAIFSTVLNSISNTLFSMDLSHTTSDEKSREFKSIIEGAMGDAGKPNVADFFPILRPIDPQGLHARMTSYFVKLAKIVDGIIEERMCSRADSKISNDVLDSLLSEIEETSSQLSRKEILQLFLDLFIGGIDTTSSTVEWAMAELLRNPNKLTKAKEELYEIIGEDATLEESHISKLPYLQAVVKETLRLHPAAAFLVPHKCDEVVNISGFQVPKNAQVLVNVWAMGRDPTIWENPNMFEPERFLKCEINFKGNNFELIPFGAGKRICPGLPLAHRSVHLMVAFLLHNFEWKLADGLTPENMNMVEHFGLTLKKIQPLRVQAISVKDN* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3171 499 PANTHER CYTOCHROME P450 FAMILY PROTEIN 7 497 - -
Lja1g3171 499 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3171 499 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3171 499 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3171 499 PRINTS P450 superfamily signature 439 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3171 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Lja1g3171 499 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 7 497 - -
Lja1g3171 499 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3171 499 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3171 499 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3171 499 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3171 499 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3171 499 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3171 499 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3171 499 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3171 499 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3171 499 SUPERFAMILY Cytochrome P450 33 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3171 499 Pfam Cytochrome P450 33 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3171 499 Gene3D Cytochrome P450 17 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3171 Lja-Chr1 38942069 38943743 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3171 8 497 Cytochrome P450 AT2G45550 47.295 2.48e-165 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3171 - - gmx:100809461 701.819