Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3170 ATGGATCTGCCTCTGATTACCTTAGTTTGTGCAAGTATTCTCACTTTGCTCATTCTTAGATTATTATACAATCAAACTCAAAATTCTACCAATCTTCCACCAGGGCCACGCCCCTTTCCTATCATAGGAAACATCTTAGAACTTGGAAGAAATCCACACGTAGCACTCACCAAACTCTCAAAGATTTACGGACCCATCATGACATTGAAACTAGGCACCATAACCACCATAGTCATCTCTTCTCCACAATTAGCCAAACAAGTGTTGCAAGAGCATGGCCAAATCTTTTCTAGTAGGACAATCCCTCATTCAATTCAAGTATCTGACAATCACAAATTCTCAGTTGGGTGGCTTCCTACAAATGCTAATATTTCCCCACAAGTGCTTGACTCCACAAAAGTCCTTCGACAACAAAAGCTGAAAGAATTGTTGGATTTTGTAAAGGAGAAGAACAGCAAAGGTGAGGCTTTGGATCTAGGTGAGGCAATTTTCTCTACTGTCCTTAATTCAATTTCAAACACTTTCTTTTCTATGGATTTGTCTCACTCAACATCTGATGAAAAGTCTCGAGAGTTTAAGACTATTATTGAGGGTTACATAGAGGAAGCTGGAAAGCCGAACGTTGCAGATTTCTTTCCTATTCTTCGTCCAATTGACCCACAGGGTGGTCATGCAAGGATGACCATTTTTTTGGTGAAGTTAGCTAAGATTTTTGATGGAATTATTGAAGAAAGAATGTGTTCACGAGTTTCAAGAGCTGATTCTAAGGTCTCCAATGATGTGCTAGATTCAATTCTTTTCGAAATTGAAGAAACAAGTTCTCAGTTGAGCCTCAGAGAGATAATGCAACTATTTCTGGATTTATTTATTGCTGGGATTGACACAACATCAAGCACGGTTGAATGGGTGATGGCAGAGCTACTACGCAATCCTGATAAATTAGCAAAAGCAAAAGAAGAGTTGTGTGAAGTAATTGGTGTAGATGCAACACTTGAAGAACCACACATCTCAAAATTACCTTTCATACAAGCAATAGTGAAGGAAACTCTTCGCTTGCACCCACCAGCTCCATTTCTACTACCATACAAGTGTGATGGAGCGGTAAACATATCTGGCTTTCAAGTGCCAAAAGATGCTCAAGTATTTGTCAATGTGTGGGCCATGGGACGAGATCCGACCATTTGGAAAAATCCATATATATTCGATCCCGATAGATTTTTGGAGTGTGAAATTAATTTTAAAGGCCATAATTTTGAGCTAATACCATTTGGGGCAGGTAAAAGGATATGCCCTGGATTACCATTAGCTCATAGGTCAGTGCATTTAATGGTGGCCTTCCTTTTGCACAACTTTGAATGGAAGTTATCTGATGGATTAACACCAGAAAACATGAATATGGTAGAACATTTCGGGTTAACCTTAAAGAGGATCCAACCACTTCGAGTTCAAGCTATTTCAGTCAAGGACAATTAA 1473 0.3924 MDLPLITLVCASILTLLILRLLYNQTQNSTNLPPGPRPFPIIGNILELGRNPHVALTKLSKIYGPIMTLKLGTITTIVISSPQLAKQVLQEHGQIFSSRTIPHSIQVSDNHKFSVGWLPTNANISPQVLDSTKVLRQQKLKELLDFVKEKNSKGEALDLGEAIFSTVLNSISNTFFSMDLSHSTSDEKSREFKTIIEGYIEEAGKPNVADFFPILRPIDPQGGHARMTIFLVKLAKIFDGIIEERMCSRVSRADSKVSNDVLDSILFEIEETSSQLSLREIMQLFLDLFIAGIDTTSSTVEWVMAELLRNPDKLAKAKEELCEVIGVDATLEEPHISKLPFIQAIVKETLRLHPPAPFLLPYKCDGAVNISGFQVPKDAQVFVNVWAMGRDPTIWKNPYIFDPDRFLECEINFKGHNFELIPFGAGKRICPGLPLAHRSVHLMVAFLLHNFEWKLSDGLTPENMNMVEHFGLTLKRIQPLRVQAISVKDN* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3170 490 PRINTS E-class P450 group I signature 280 297 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3170 490 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3170 490 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3170 490 PRINTS E-class P450 group I signature 430 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3170 490 PRINTS E-class P450 group I signature 343 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3170 490 PRINTS E-class P450 group I signature 420 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3170 490 PRINTS E-class P450 group I signature 384 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3170 490 PRINTS E-class P450 group I signature 300 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3170 490 PRINTS P450 superfamily signature 430 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3170 490 PRINTS P450 superfamily signature 344 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3170 490 PRINTS P450 superfamily signature 291 308 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3170 490 PRINTS P450 superfamily signature 421 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3170 490 Pfam Cytochrome P450 33 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3170 490 Gene3D Cytochrome P450 18 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3170 490 PANTHER CYTOCHROME P450 FAMILY PROTEIN 7 488 - -
Lja1g3170 490 SUPERFAMILY Cytochrome P450 33 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3170 490 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 7 488 - -
Lja1g3170 490 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 423 432 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3170 Lja-Chr1 38908623 38910322 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3170 29 488 Cytochrome P450 AT2G45550 46.105 1.73e-149 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3170 - - gmx:100809461 664.455