Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3166 ATGTTAGTGTCTCAAAAGCTCAGAATGTCACTGCTAACTATGTTTCAACAGAGACTTAACAAATCCTTTTCTCTTCTTTGGCTTCATTTGTTTCTAATCTTGCTGACAAGTGCTTCAGTTAATGGAGTAGAGAAAAAGAAATTTTACATTGCATTCTTGGGAGCTAATCCTGTGAGCACAGACAATGCAATTGAGACTCATTTGAATGTTCTATCTGCTGTGAAGGGAAGCCACCTTGAAGCCAAAGAATCTATTGTATATAGCTACACAAAGAGCTTCAATGCATTTGCTGCAAAACTGTCTGAGAAAGAAGCCAAGAAATTATCTTCCATGGATGAAGTACTCTTGGTATTTCAAAATCAGTACCGAAAGCTACACACAACAAGATCATGGAACTTCGTTGGGTTACCTCAGACTGCTAAGAGAAGATTGAAGAAAGAGAGTAATGTAGTTGTTGCTCTTTTAGATACAGGGATCACACCTGAGTCTAAAAGCTTCAAGGATGATGGATTTGGTCCTCCACCAGCAAAATGGAAAGGAACTTGTGGCCACTATGCAAATTTCTCAGGATGCAATAACAAGATCATTGGAGCCAAATACTTCAAGGCTGATGGAGACATTTTTGAACCAGATATATTATCTCCAATTGATGTTGATGGCCATGGCACTCACACAGCATCAACGGCTGCAGGGACTCTGGTCCCCAATGCAAGTCTCTTTGGGCTGGCCAATGGCACGGCACGCGGCGCTGTGCCATCAGCTAGGTTGGCAATGTACAAGGTCTGCTGGTCACTCACTGGATGTGCAGACATGGACATACTTGCTGCATTTGAAGCTGCTATCCATGATGGTGTGGATGTCATATCCATTTCCATAGGTGGAGGCAATGCAGATTATGATCATGACTCTATTGCAATTGGTGCATTTCATGCCATGAAGAAAGGTATAATCACAGTTGCCTCAGCTGGAAATGATGGTCCAAGTATGGGAACTGTAACAAATACTGCACCATGGATTGTAACAGTAGCAGCTAGTGGCATTGACAGAACTTTCAGGAGCACTGCGCAGTTAGGCAGTGGAAAGAATGTTTCTGGGATAGGAGTGAACTGTTTCAATCCAAAACGAAAAGAGTACTCTCTTATCAATGGGATTGATGCAGCCAAGGACTCAAAGAGTAAGGATGATGCAGGTTTCTGCTATGAAGACTCCTTAGAGCCAAATAAGGTGAAGGGAAAGCTTGTTTACTGCAAATTAGGAAATTGGGGCACTGAAGGTGTTGTGAAAAAATTTGGGGGAATTGGTAGTATAATGGAAAGTGACCAATATCCTGATCTTGCTCAAATTTTCATGGCTCCTGCTACCATTCTGAATCATACCATAGGTGAAAGTGTTACCAATTATATAAAATCCACAAGATCGCCCTCAGCAGTGATATACAAGACACATGAGGAAAAATGTCCTGCTCCATTTGTTGCTACATTCTCATCTAGAGGTCCAAATCCAGGATCTCATAATGTTCTCAAGCCTGACATTGCAGCTCCTGGCATTGACATCTTGGCATCTTATACTCTTAGAAAGTCAATCACTGGTTCTGAAGGGGATACCCAATTTTCAGAATTTTCTCTATTGTCTGGGACTTCCATGGCATGTCCTCATGTTGCTGGAGTAGCAGCATATGTGAAATCATTTCATCCAAATTGGACTCCTGCTGCAATCAGATCTGCTATTATCACCACAGCCAAACCTATGAGCAGAAGAATCAACAATGATGCTGAATTTGCCTTTGGTTCTGGTCAATTGAACCCAACAAGAGCTTTGAACCCTGGTCTGGTCTATGATATGGATGACTTTGCATACATCCAGTTCCTATGCAATGAGGGTTATAATGGTTCAAGTTTATCGGCATTAGTTGGTTCTCCTATAAATTGCTCCTCTTTGATTCCTGGGCTTGGCCATGATGCTATGAACTACCCCAGCATGCAACTTAGCTTGGAAAGCAACAAAGCCACAAAAATGGTAGTTTTCAGAAGAACAGTGACTAATGTGGGTCCTGCTCCAACTATCTACAATGCCACAATTAGATCACCTAAAGGAGTGGAAATCACAGTGAAGCCTAGTACCCTCGTTTTTTCAAAAACCATGCAGAAGAAGAGCTTCAAAGTAGTTGTGAATGTCAAATCTATTGCAAGTATGAAAATGCTATCAGGTTTACTTATATGGAGGAACCCACGTTACATTGTCAGGAGCCCTATAGTTATCTACAGACAATAA 2271 0.4157 MLVSQKLRMSLLTMFQQRLNKSFSLLWLHLFLILLTSASVNGVEKKKFYIAFLGANPVSTDNAIETHLNVLSAVKGSHLEAKESIVYSYTKSFNAFAAKLSEKEAKKLSSMDEVLLVFQNQYRKLHTTRSWNFVGLPQTAKRRLKKESNVVVALLDTGITPESKSFKDDGFGPPPAKWKGTCGHYANFSGCNNKIIGAKYFKADGDIFEPDILSPIDVDGHGTHTASTAAGTLVPNASLFGLANGTARGAVPSARLAMYKVCWSLTGCADMDILAAFEAAIHDGVDVISISIGGGNADYDHDSIAIGAFHAMKKGIITVASAGNDGPSMGTVTNTAPWIVTVAASGIDRTFRSTAQLGSGKNVSGIGVNCFNPKRKEYSLINGIDAAKDSKSKDDAGFCYEDSLEPNKVKGKLVYCKLGNWGTEGVVKKFGGIGSIMESDQYPDLAQIFMAPATILNHTIGESVTNYIKSTRSPSAVIYKTHEEKCPAPFVATFSSRGPNPGSHNVLKPDIAAPGIDILASYTLRKSITGSEGDTQFSEFSLLSGTSMACPHVAGVAAYVKSFHPNWTPAAIRSAIITTAKPMSRRINNDAEFAFGSGQLNPTRALNPGLVYDMDDFAYIQFLCNEGYNGSSLSALVGSPINCSSLIPGLGHDAMNYPSMQLSLESNKATKMVVFRRTVTNVGPAPTIYNATIRSPKGVEITVKPSTLVFSKTMQKKSFKVVVNVKSIASMKMLSGLLIWRNPRYIVRSPIVIYRQ* 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3166 756 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 48 754 IPR045051 -
Lja1g3166 756 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.14 48 754 - -
Lja1g3166 756 CDD PA_subtilisin_like 354 478 - -
Lja1g3166 756 Pfam Subtilase family 148 596 IPR000209 GO:0006508|GO:0008236
Lja1g3166 756 Gene3D - 348 484 - -
Lja1g3166 756 SUPERFAMILY Subtilisin-like 125 610 IPR036852 GO:0004252|GO:0006508
Lja1g3166 756 ProSitePatterns Serine proteases, subtilase family, serine active site. 545 555 IPR023828 -
Lja1g3166 756 ProSiteProfiles Serine proteases, subtilase domain profile. 130 606 - -
Lja1g3166 756 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 36 126 IPR037045 -
Lja1g3166 756 PRINTS Subtilisin serine protease family (S8) signature 544 560 IPR015500 -
Lja1g3166 756 PRINTS Subtilisin serine protease family (S8) signature 217 230 IPR015500 -
Lja1g3166 756 PRINTS Subtilisin serine protease family (S8) signature 147 166 IPR015500 -
Lja1g3166 756 Pfam Fibronectin type-III domain 655 753 IPR041469 -
Lja1g3166 756 CDD Peptidases_S8_3 124 580 IPR034197 -
Lja1g3166 756 Gene3D Peptidase S8/S53 domain 149 616 IPR036852 GO:0004252|GO:0006508
Lja1g3166 756 Pfam Peptidase inhibitor I9 60 126 IPR010259 -
Lja1g3166 756 Gene3D - 623 755 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3166 Lja-Chr1 38787777 38793136 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3166 38 594 Subtilisin-like Serine Gene Family AT4G00230 65.889 0.0 753
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3166 - - gmx:100795950 1179.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3166 1 38787777 38793136 Lja1g3166 1 38787777 38793136 ECH
Lja1g3166 1 38787777 38793136 Lja3g4763 3 89724776 89729461 PCT
Lja3g1972 3 22629944 22639753 Lja1g3166 1 38787777 38793136 PCT