Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3165 ATGATCTCTAGGATGCTCTTCCTATTCCTTGCTTTTATGGTGACAAATTCAATAGCTTCCATGACCCAGCAGACATACATTGTACACATGGACAAGACCATAATCAGATCCTCAATTCATTCTCAAGACAGCACAAAACCATGGTTTGAATCAATCATTGATTTCATTTCTGAAGCTTCAATGGAGGAATCAGAAGAAAATGAAAATGAAATTTTAGCCCCTGAACTCCTTTATGCCTATGAAACCAACATGTTTGGTTTTGCTGCTCACCTTTCTGAGAAACAGCTCAAATACTTGAACCAAGTGGATGGTTTCCTCTCAGCCATTCCTGATGAACTGTTAACCCTCCACACAACATACACCCCACATTTTCTTGGCCTGAGTAATGGAAAAGGACTTTGGAGTGCTCACAATTTGGCCTCAGATGTGATCATTGGGGTCCTTGATTCAGGAATATGGCCTGAACACATCAGTTTCAAAGACTCAGGTTTTTCCGCGGTACCTCCTCGCTGGAAAGGTGTTTGTGAACAAGGAACCAAGTTCTCTGCCTCAAATTGCAACAAGAAGCTAATCGGCGCAAGAACCTATTTAAAAGGGTATGAAAGATCTATTGGAAAAATCAATGAAACAACCGATTATCGTTCTCCTAGAGACTCCCAAGGCCACGGAACACACACAGCTTCAACTGCAGCCGGTAACGCGGTGAAGAATGCCAACCTTTTTGGCCTGGCTAGAGGCTCGGCAACTGGAATCAGGTACACCTCAAGAATTGCAGCTTACAAAGTATGCTGGCGATCCGGCTGCGCTAACTCTGATGTACTAGCCGGCATGGACCAAGCGGTTTCTGATGGGGTTGATGTGTTGTCACTCTCTTTAGGGAGCATTCCAAAACCTTTTTACAATGACAGCATTGCCATAGCTGCATTTGGCGCAATCCGAAACGGTGTTTTTGTTTCTTGCTCCGCAGGAAACTCAGGCCCCTTTGCATCCACAGTTGCGAATGGTGCCCCATGGATAATGACAGTTGCTGCTAGCTACACTGACAGAAGCTTCCCAACAAGAGTAAAACTAGGGAATGCAAGAGTTTTTGAAGGGACATCTTTGTACCTAGGAAACCAAACAAAACAATTGCCTCTTGTCTATGGCAATTCATCAAGCACAAAGAGGATAGGACAGTTTTGCACCAAAGGCTCACTTGATCCAAAGCTTGTGAAAGGGAAAATAGTTGTTTGTGAGAGAGGAATCAACAGCAGAACTGAAAAGGGTGAGGAAGTGAAAAATTCAGGTGGGGCAGGAATGATTCTACTCAACTCTGAGAGTCAAGGAGAAGAGCTTCTTGCAGATTCTCACATTTTGCCAGCAACTTCCTTAGGTGCTTCAGCAGGTAAGATTATCAGAAGTTACATTAGTTCAACAAAAAAACCAACAGCTTCAATTTCCTTTATAGGGACAAGGTTTGGTGACCCTGCACCAGTAGTTGCAGCATTTTCTTCCAGAGGACCAAGCATTGTAGGGCTAGATGTGATTAAGCCAGATGTAACTGCACCTGGTGTGCACATTCTTGCTGCTTGGCCTTCCAAAACTAGCCCTAGCATGCTCAAGAATGACAAAAGAAGAGTGCTTTTTAACATAATCTCAGGCACTTCTATGTCATGCCCTCATGTTAGTGGTGTCGCAGCGCTGATTAGATCAGTGCACAGAGATTGGTCTCCTGCAGCAGTTAAATCTGCTCTCATGACCACTGCTTACACATTGAACAACAAAGGAGCTCCAATTTCAGACATTGGCGCCTCAAACTCAATCTCAAATTCAAATTCAAATCACTCTGGATTTGCTGTCCCCTTTGCATTTGGTTCAGGCCATGTTAACCCAGAAAGTGCTTCTGATCCTGGGTTAGTGTATGATATCACTCCCAAAGACTACTTGAATTACTTCTGCAGCCTAAACTATACCTCTACCCAGATTGCTATATTGTCAAGAGGTAATAACTTTACATGTTCTAGAAAATCAGTTCTTCAAGTTGGTGACTTGAACTACCCTTCTTTTGCTGTGCTCTTTGGTAAGAGTTCCCTTAATGCTAGTGTGACATACAAGAGGGTTGTTACAAATGTTGGAAAACCCCAAAGTGTTTATGGTGTTAAAGTGGAACAACCAAAAGGGGTTTCAGTTAGTGTTGTACCAAGGAAATTGAAGTTTGAGAAACTAGGTCAGAAATTGAGCTATAAAGTGACATTTTTTGCAATTGGAAAAGCAAGAGCTGCAAGTACCTCATCATTTGGGTCACTGATTTGGGAATCTGGGAAATACAAGGTGAGAAGTCCCATAGCAGTGACCTGGCAATAG 2343 0.4298 MISRMLFLFLAFMVTNSIASMTQQTYIVHMDKTIIRSSIHSQDSTKPWFESIIDFISEASMEESEENENEILAPELLYAYETNMFGFAAHLSEKQLKYLNQVDGFLSAIPDELLTLHTTYTPHFLGLSNGKGLWSAHNLASDVIIGVLDSGIWPEHISFKDSGFSAVPPRWKGVCEQGTKFSASNCNKKLIGARTYLKGYERSIGKINETTDYRSPRDSQGHGTHTASTAAGNAVKNANLFGLARGSATGIRYTSRIAAYKVCWRSGCANSDVLAGMDQAVSDGVDVLSLSLGSIPKPFYNDSIAIAAFGAIRNGVFVSCSAGNSGPFASTVANGAPWIMTVAASYTDRSFPTRVKLGNARVFEGTSLYLGNQTKQLPLVYGNSSSTKRIGQFCTKGSLDPKLVKGKIVVCERGINSRTEKGEEVKNSGGAGMILLNSESQGEELLADSHILPATSLGASAGKIIRSYISSTKKPTASISFIGTRFGDPAPVVAAFSSRGPSIVGLDVIKPDVTAPGVHILAAWPSKTSPSMLKNDKRRVLFNIISGTSMSCPHVSGVAALIRSVHRDWSPAAVKSALMTTAYTLNNKGAPISDIGASNSISNSNSNHSGFAVPFAFGSGHVNPESASDPGLVYDITPKDYLNYFCSLNYTSTQIAILSRGNNFTCSRKSVLQVGDLNYPSFAVLFGKSSLNASVTYKRVVTNVGKPQSVYGVKVEQPKGVSVSVVPRKLKFEKLGQKLSYKVTFFAIGKARAASTSSFGSLIWESGKYKVRSPIAVTWQ* 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3165 780 Pfam PA domain 377 464 IPR003137 -
Lja1g3165 780 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 16 780 IPR045051 -
Lja1g3165 780 CDD PA_subtilisin_like 355 479 - -
Lja1g3165 780 Pfam Subtilase family 141 590 IPR000209 GO:0006508|GO:0008236
Lja1g3165 780 PRINTS Subtilisin serine protease family (S8) signature 140 159 IPR015500 -
Lja1g3165 780 PRINTS Subtilisin serine protease family (S8) signature 218 231 IPR015500 -
Lja1g3165 780 PRINTS Subtilisin serine protease family (S8) signature 546 562 IPR015500 -
Lja1g3165 780 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 145 156 IPR023827 -
Lja1g3165 780 ProSitePatterns Serine proteases, subtilase family, serine active site. 547 557 IPR023828 -
Lja1g3165 780 Gene3D - 645 779 - -
Lja1g3165 780 Pfam Peptidase inhibitor I9 25 117 IPR010259 -
Lja1g3165 780 ProSiteProfiles Serine proteases, subtilase domain profile. 119 628 - -
Lja1g3165 780 SUPERFAMILY Subtilisin-like 116 632 IPR036852 GO:0004252|GO:0006508
Lja1g3165 780 CDD Peptidases_S8_3 114 583 IPR034197 -
Lja1g3165 780 Gene3D Peptidase S8/S53 domain 142 641 IPR036852 GO:0004252|GO:0006508
Lja1g3165 780 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 12 117 IPR037045 -
Lja1g3165 780 Gene3D - 348 486 - -
Lja1g3165 780 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.1 16 780 - -
Lja1g3165 780 MobiDBLite consensus disorder prediction 209 228 - -
Lja1g3165 780 Pfam Fibronectin type-III domain 676 777 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3165 Lja-Chr1 38765954 38768383 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3165 20 780 Subtilisin-like Serine Gene Family AT1G01900 54.987 0.0 823
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3165 - - gmx:100790006 1207.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3165 1 38765954 38768383 Lja1g3165 1 38765954 38768383 ECH