Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3151 ATGGGTTTCAACAGCTGTGCAATTTTGTTCTCTATGCTGTCCATACAGTGTTGTTATTTGTTAAATATTGTTATTGCTATAGACACCATCACCTCATCTCAATTCATCAAGGATCCTGAAACTCTAAGCTCCAAAGATGGTAACTTCACCTTGGGGTTCTTTAGCCCTGGGAATTCCACATACCGCTACGTTGGAATTTGGTGGAAATCTCCATCCACAGTCATATGGGTGGCTAACAGAAACCAACCACTGAATGATTCTTCTGGGGTTGTCACAATATCTGAAGATGGAAACCTTGTGGTATTGAATGGACACAAAACACTCATTTGGTCATCAAATGTTTCAAACACATCCAACAGAACTAGGTCCACGTTTTCAGGTTTTGGTAAACTTGTCCTTTTGGAAACCACAAAAGGAAACATCTTATGGCATAGTATACAGCATGCTTCAGACACAATACTACCAGGTATGAAACTTACAAGCAATGAAACAAGAAGAAGTGAGAAACATAAACTCACATCATGGAAAAGTCCTTCTGATCCTTCTTTTGGGAGCTTCTCTTCTTGGAGTGTCAATCGCCCATATATGCCTGAAGTGTTCATTTGGAAGGAAACAATACCATATTGGAGAAGTGGACCATGGAATGGAAGGGTCTTTACAGGGATACAAGGGATGGAATATGCATATGTTAATGGTTTTTATGGTGGAGATGATGGAGAAGGAAATATTGATATCTATTATATAACAAGAAATGAGTCGGAACCAGTGATCTATAATCTGAATTGGCAAGGCCAGTATCAAGCCAAATGTTGGGATGATGAGAAGGATGAAATGCGAATTTTATGGACTAGCCAAGAATCAGAGTGTGATGTGTATGGTACATGTGGGGCATTTGCAATCTGTAGTTCTCAAAGCTCACCAATATGCAGCTGTTTGAGAGGGTTTGAGCCCAAGAACAAAGAGGAGTGGAATAGTCAAAATTGGACTAGTGGGTGTGTTAGGAGGACAAGTTTGGAGTGTGATGGGGTCAACAATACTAAAACAAATGCTGATGGGTTTCTGAAATTGGAAATGGTTAAAGTACCAGATTCTGCAGGAGGGTCACCTGTTGAACCAGACTTATGCAGAAGCCAATGCTTGGAGAATTGCTCCTGCATTGCATATTCTCATGATGGTGGGATTGGCTGCATGTCTTGGAATGGAAATCTACTTGACATACAACAATTCTCAGAAGGAGGACTTGATCTATATGTTCGCGTAGCCTACACAGAACTTGATCATGGGACAAACACAACAATCATCATCACAGTTACAGTGACAGTAGGATCTATCATAATTGTTGTTTTTGCCTATATTATGTGGAGAAGAAGGGCTTCTAATCATCCAGCTAAACTGTGGCACTGTTTTAGATCAACAAGGGGAAAGAACAACAAAGCTTTCCCTCTATTTAATGAAGTTGGAACATCTGAAGAATATAAAGATGACAACATAATTGAAGAATTGTCACAAGTTAATCCCAAGGAGCTAATACTATTTGATTTTGAAAAGGTTGCAATTGCCACAAACACCTTCCATTTTTCTAACAAACTTGGACAAGGTGGTTTTGGTCTGGTATACAAGGGGAAACTGCAAGATGGTCAAGAAATAGCAGTTAAAAGACTTTCTAGAGCATCTGGACAAGGGCTAGAAGAATTCAAGAATGAAGTAGTGGTACTTTGTAAGCTTCAACACCGCAATCTTGTAAGACTTCTAGGTTGCTGCATTGGAGGTGGTGAAAAGATGTTGATATATGAGTACATGCCAAATAAAAGTTTGGATGCAAATATCTTTGATCCATCCAAAAATAAAGCCTTAGATTGGAGGACACGATGTGGCATAATTGAAGGAGTAGCTCGAGGATTGCTTTATCTTCATAGAGATTCAAGACTAAGAATCATACACAGAGATTTGAAGCCAAGTAATATCTTGTTAGATGAGGAGCTGAATCCAAAAATATCAGATTTTGGTATGGCTAGAATCTTTGGAAGGAGTGAAGATCAGGCCAATACAGGAAGAATTGTTGGAACTTATGGTTACATGTCCCCTGAATATGCAATGCAAGGACTGTTTTCAGAGAAATCAGATGTCTTCAGCTTTGGTGTTCTGATACTAGAGATTGTTAGTGGGAAAAGAAACTCAAGCTTTTATGACAACGAGCATGCTCTCAGCCTTTTAGGATTTGCCTGGATACAATGGAGGGAAGGCAGTATCTCATCTTTAATAGATCCAAGCATGTATGATCCCAGTCATCAGAAGTCTATTATAAGGTGCCTACATATAGGGCTTCTGTGTGTGCAAGAACATGCTGTGGACAGACCAACTATGGCTACAGTGATTTCTATGCTTAATAGTGATGTTGAAATTCTTCCTCCTCCAAGTCAACCAGCATTCATCTTGAGGAAGAACATGTTGAGTTCAGTGTCATATGAAGAAAGGCATGAAGTATCTTCCATCAATACAATCAGCTTGACTGACATCTATGCTAGATAG 2529 0.3942 MGFNSCAILFSMLSIQCCYLLNIVIAIDTITSSQFIKDPETLSSKDGNFTLGFFSPGNSTYRYVGIWWKSPSTVIWVANRNQPLNDSSGVVTISEDGNLVVLNGHKTLIWSSNVSNTSNRTRSTFSGFGKLVLLETTKGNILWHSIQHASDTILPGMKLTSNETRRSEKHKLTSWKSPSDPSFGSFSSWSVNRPYMPEVFIWKETIPYWRSGPWNGRVFTGIQGMEYAYVNGFYGGDDGEGNIDIYYITRNESEPVIYNLNWQGQYQAKCWDDEKDEMRILWTSQESECDVYGTCGAFAICSSQSSPICSCLRGFEPKNKEEWNSQNWTSGCVRRTSLECDGVNNTKTNADGFLKLEMVKVPDSAGGSPVEPDLCRSQCLENCSCIAYSHDGGIGCMSWNGNLLDIQQFSEGGLDLYVRVAYTELDHGTNTTIIITVTVTVGSIIIVVFAYIMWRRRASNHPAKLWHCFRSTRGKNNKAFPLFNEVGTSEEYKDDNIIEELSQVNPKELILFDFEKVAIATNTFHFSNKLGQGGFGLVYKGKLQDGQEIAVKRLSRASGQGLEEFKNEVVVLCKLQHRNLVRLLGCCIGGGEKMLIYEYMPNKSLDANIFDPSKNKALDWRTRCGIIEGVARGLLYLHRDSRLRIIHRDLKPSNILLDEELNPKISDFGMARIFGRSEDQANTGRIVGTYGYMSPEYAMQGLFSEKSDVFSFGVLILEIVSGKRNSSFYDNEHALSLLGFAWIQWREGSISSLIDPSMYDPSHQKSIIRCLHIGLLCVQEHAVDRPTMATVISMLNSDVEILPPPSQPAFILRKNMLSSVSYEERHEVSSINTISLTDIYAR* 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3151 842 SMART ntp_6 348 420 IPR003609 -
Lja1g3151 842 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-13 12 822 - -
Lja1g3151 842 SUPERFAMILY alpha-D-mannose-specific plant lectins 64 181 IPR036426 -
Lja1g3151 842 ProSiteProfiles PAN/Apple domain profile. 340 421 IPR003609 -
Lja1g3151 842 Gene3D Phosphorylase Kinase; domain 1 485 599 - -
Lja1g3151 842 CDD B_lectin 33 145 IPR001480 -
Lja1g3151 842 Pfam PAN-like domain 348 406 IPR003609 -
Lja1g3151 842 SMART blect_4 33 149 IPR001480 -
Lja1g3151 842 Pfam Protein tyrosine and serine/threonine kinase 525 794 IPR001245 GO:0004672|GO:0006468
Lja1g3151 842 ProSitePatterns Serine/Threonine protein kinases active-site signature. 645 657 IPR008271 GO:0004672|GO:0006468
Lja1g3151 842 ProSitePatterns Protein kinases ATP-binding region signature. 530 552 IPR017441 GO:0005524
Lja1g3151 842 SMART serkin_6 524 829 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g3151 842 CDD STKc_IRAK 530 796 - -
Lja1g3151 842 ProSiteProfiles Protein kinase domain profile. 524 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g3151 842 Gene3D Transferase(Phosphotransferase) domain 1 600 801 - -
Lja1g3151 842 Pfam S-locus glycoprotein domain 209 319 IPR000858 GO:0048544
Lja1g3151 842 SUPERFAMILY Protein kinase-like (PK-like) 509 833 IPR011009 -
Lja1g3151 842 ProSiteProfiles Bulb-type lectin domain profile. 27 146 IPR001480 -
Lja1g3151 842 CDD PAN_AP_plant 336 421 - -
Lja1g3151 842 Gene3D - 23 148 IPR036426 -
Lja1g3151 842 Pfam D-mannose binding lectin 73 176 IPR001480 -
Lja1g3151 842 PANTHER - 12 822 - -
Lja1g3151 842 PIRSF SRK 2 842 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3151 Lja-Chr1 38496489 38500475 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3151 508 810 Receptor kinase-like Gene Family AT4G23230 59.406 7.92e-126 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lja1g3151 PK_Tyr_Ser-Thr 8.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3151 - - lja:Lj1g3v2611530.1 1377.07