Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3139 ATGGAAAACCCAGAAGCAAAGCTCGAAACTTTCATGCAGTGGCTGCAGACAAATGGAGTGGAGCTACGAGGTTGCAAGATCAAGTACTGTGATTCCAGAAAAGGGTTTGGCATCTTTTCTGATAATGATGTTTCTGATGGGGTTCTGGTGGTTGTTCCACTAGACTTAGCAATTACTCCGATGAGGGTGTTGCAAGACCCTCTTTTAGGACCAGAGTGTAGGGCAATGTTTGAAGAAGGAGATGTAGATGACAGGTTATTAATGATGCTGTTGCTGACTGTGGAGCGTTTGCGTAAGAATTCTCCATGGAAGCCGTACCTTGCTATGCTTCCAACCACTTTTCAAAATACACTTTGGTTTAGTGATGATGAACTTCAAGAGCTAAGAGGAACCACATTATATCGTGCAACTGAATTACAGAAGAAAAGCCTGCTGTCATTGTATGAAACTAAAGTGAAGGATGTAGTCAAGAAGCTTTTGGCTCTTGATGGAGATTCAGAGATTGAGTCGTGCTTTGAAGATTTCCTTTGGGCAAATTCAGTATTTTGGAGCCGGGCTTTGAACCTCCCTTTGCCTCGTTCTTATGTATTTCCAGAAATGCAAGAAGTTCAAGAGAGTTGCATTCTAGAAGCTGATGAAAAAATAAGCCAGGATAAAAAACAGGACAATCTAACCAAGGAAATTACATGTAACACAGTGCAAGGAGACACTGTATGGGTTGAAGGTCTTGTCCCTGGCATTGACTTCTGCAACCATGATCTGAAGCCAAAAGCGACATGGGAAGTTGATGGAACTGGTTTAACAACAGGAGTTCCTTTCTCCATGTATCTCATTTCCGCTGCTCAAAGTCCCTTGCAGACTGATCAAGAAATTTCCATTAGTTATGGCACCAAGGGAAATGAGGAACTTCTATATCTGTACGGTTTTGTCATTGATGGTAACACAGATGACTATCTCATGGTCCACTATCCAACAGAAGCAATTAGTACTATTTCTTTTTCAGAAGCCAAAAGCCAGCTTCTTGAAGTGCAGAATGCTGAAATGAGATGTCTTTTACCCAAAGCTTTGCTGGAGCATGGATTTTTTCCATTAGGCACACGAAACAGTGGAGAAAATAACAAGTCCAACCAAGTTTGCAACTATAGTTGGAGTGGTCAGCGCAAAATGCCATCTTATGTAAACAAGCTGGTTTTTCCTGAGAAGTTTATAGCCACCTTGAGGACCATAGCCATGCAAGAAGATGAGCTTTTCAAGGTTTCCTCAATGCTGGAAGAGCTTGCTGGACCTGAAAGGGAGAGACAACCGTCTGATACAGATGTCCAATCAGCAATATGGGAGGTGTGCGGCGATTCCGGAGCCTTACAATTGCTTGTTGATCTTCTTCATGTAAAGTTGATGGATCTTGAAGAGAGTTCTGGAACAGAAGAAAGTGACCATGATTTACTCAAGAAAGCCCTTATTATTGATAGCCAGGATGATAGCAAACAGTGCACGAGCAATTTAAGCACATTTGCAAATGACTCAGAAGAATCAAAGTTGATGATGACTAGAAACAAATGGTCAGCTATAGTGTACCGGCAAGGCCAGAAGGAGCTAACTCGATTATTCTTGAAAGAAGCAGAACATGCTCTGGAGTTATCACAAAACGAAGAGGTGAATGCTCCTTGA 1668 0.4197 MENPEAKLETFMQWLQTNGVELRGCKIKYCDSRKGFGIFSDNDVSDGVLVVVPLDLAITPMRVLQDPLLGPECRAMFEEGDVDDRLLMMLLLTVERLRKNSPWKPYLAMLPTTFQNTLWFSDDELQELRGTTLYRATELQKKSLLSLYETKVKDVVKKLLALDGDSEIESCFEDFLWANSVFWSRALNLPLPRSYVFPEMQEVQESCILEADEKISQDKKQDNLTKEITCNTVQGDTVWVEGLVPGIDFCNHDLKPKATWEVDGTGLTTGVPFSMYLISAAQSPLQTDQEISISYGTKGNEELLYLYGFVIDGNTDDYLMVHYPTEAISTISFSEAKSQLLEVQNAEMRCLLPKALLEHGFFPLGTRNSGENNKSNQVCNYSWSGQRKMPSYVNKLVFPEKFIATLRTIAMQEDELFKVSSMLEELAGPERERQPSDTDVQSAIWEVCGDSGALQLLVDLLHVKLMDLEESSGTEESDHDLLKKALIIDSQDDSKQCTSNLSTFANDSEESKLMMTRNKWSAIVYRQGQKELTRLFLKEAEHALELSQNEEVNAP* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3139 555 Pfam SET domain 35 296 IPR001214 GO:0005515
Lja1g3139 555 ProSiteProfiles SET domain profile. 25 296 IPR001214 GO:0005515
Lja1g3139 555 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 4 551 - -
Lja1g3139 555 PANTHER SET DOMAIN-CONTAINING PROTEIN 4 551 - -
Lja1g3139 555 SUPERFAMILY SET domain 7 314 IPR046341 -
Lja1g3139 555 CDD SET_LSMT 31 310 - -
Lja1g3139 555 Gene3D set domain protein methyltransferase, domain 1 5 310 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3139 7 310 NAC Transcription Factor Family AT3G56570 23.653 1.13e-06 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lja1g3139 SET 1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3139 - - gmx:100777394 906.746