Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lja1g3112 | ATGGGAAGGACACCATGTTGTGACAAGAAGGGTTTGAAGAAAGGACCATGGACAGCTGAAGAGGATGAAGTTCTTACTAATTATATCAAGAAGAATGGTGGTCATGGAAGCTGGCGTTCTCTCCCCAAGATGACAGGTCTTCTTCGTTGTGGTAAGAGTTGCCGGCTTCGGTGGACAAACTATCTGAGACCTGACATTAAACGTGGTCCATTTACTCCTGAGGAAGAAAAACTAGTCATTCAGCTTCATGGCATCCTAGGAAATAGGTGGGCTGCAATTGCCTCTCAGCTACCAGGAAGAACTGACAATGAAATAAAAAACTTTTGGAACACCCACTTGAAGAAACGTCTCAAAGCCCTGGGTCTTGACCCAAAAACCCACCAGCCCAACCATGCACCTTCTGCATCATCTTCCATTTCCACACGCCACATGGCTCAATGGGAAGGTGCAAGGCTTGAAGCAGAGGCAAGGCTTTCAAGCCTCAACACCACCAAAACAACTCACCACTGTGACCACTTCCTCCGCATGTGGAACTCTGAAATTGGAGATTCATTTCGCAACTTTCACAAGCCAGATCATAATCAAAACAAGAACATTAACAGCTTCTGCTTGAGTCCTCTTTCTGCAGGATCATCTTCCAACAAATGTGACTCAGTTTCTGCTGTTACTACTAATGCTGCTGACCCATTTGGATCCTCAAACAATGCTGTGAAACAAGAGTTGTTGTGTGCTGAAGAAGATGTGGTTCAGCATCATGGGTCTGATTCATCATGCTCTAATGACTTGGAGGACTCATCAGACACTGCTTTGCAGCTCTTACTAGATTTTCCTATCTACAATGACATGAGCTTCTTAGAAGGAAACTCTTTTGTTTGTCCCCTCTAG | 885 | 0.4475 | MGRTPCCDKKGLKKGPWTAEEDEVLTNYIKKNGGHGSWRSLPKMTGLLRCGKSCRLRWTNYLRPDIKRGPFTPEEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNFWNTHLKKRLKALGLDPKTHQPNHAPSASSSISTRHMAQWEGARLEAEARLSSLNTTKTTHHCDHFLRMWNSEIGDSFRNFHKPDHNQNKNINSFCLSPLSAGSSSNKCDSVSAVTTNAADPFGSSNNAVKQELLCAEEDVVQHHGSDSSCSNDLEDSSDTALQLLLDFPIYNDMSFLEGNSFVCPL* | 295 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lja1g3112 | 294 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 9 | 62 | IPR017930 | - | |
Lja1g3112 | 294 | MobiDBLite | consensus disorder prediction | 123 | 146 | - | - | |
Lja1g3112 | 294 | Gene3D | - | 70 | 143 | - | - | |
Lja1g3112 | 294 | CDD | SANT | 16 | 62 | IPR001005 | - | |
Lja1g3112 | 294 | PANTHER | PROTEIN ODORANT1-LIKE | 1 | 288 | - | - | |
Lja1g3112 | 294 | MobiDBLite | consensus disorder prediction | 129 | 144 | - | - | |
Lja1g3112 | 294 | ProSiteProfiles | Myb-like domain profile. | 63 | 113 | IPR001005 | - | |
Lja1g3112 | 294 | Pfam | Myb-like DNA-binding domain | 14 | 62 | IPR001005 | - | |
Lja1g3112 | 294 | Pfam | Myb-like DNA-binding domain | 68 | 113 | IPR001005 | - | |
Lja1g3112 | 294 | Gene3D | - | 11 | 68 | - | - | |
Lja1g3112 | 294 | SUPERFAMILY | Homeodomain-like | 11 | 109 | IPR009057 | - | |
Lja1g3112 | 294 | SMART | sant | 67 | 115 | IPR001005 | - | |
Lja1g3112 | 294 | SMART | sant | 13 | 64 | IPR001005 | - | |
Lja1g3112 | 294 | CDD | SANT | 70 | 113 | IPR001005 | - | |
Lja1g3112 | 294 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 63 | 117 | IPR017930 | - | |
Lja1g3112 | 294 | ProSiteProfiles | Myb-like domain profile. | 9 | 62 | IPR001005 | - | |
Lja1g3112 | 294 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR | 1 | 288 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lja1g3112 | Lja-Chr1 | 37993956 | 37996645 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lja1g3112 | 1 | 288 | MYB Transcription Factor Family | AT3G61250 | 61.716 | 2.55e-119 | 342 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Lja1g3112 | Myb_DNA-binding | 2.7e-12 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lja1g3112 | K09422 | - | gmx:100800408 | 420.624 |