Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3087 ATGCCAGAGAGGTCCAAAAGATTCCCTGTCCAGTATGAGAAAGACCAGTCAGGTTGTATGTGGGGTTTTATCAGTATATTTGATTTTCGCCATGGCCGCTCTACTTGGAAGTTAATTGCAGATCGGAGTCACAGCAGCAGGCATGCTGTTGGTTCTATACTTGCCAAGAACAAGTTTGAGACATTGAGCAATTTGGATGAAGAATATCAGGGCAATTTTGACAGAGTAGAGAGTAAAAGACTAACAGTGACAACTGATGCTGATAAGCTTAGTGTGAAGAAACTTATAGAAGAAGAAATGTTCATTGACCAGGATGATGTAAAGGATCAAGTTAATGCTGAAGTAGAATCAAAGCAATCCAGATCAGGGCGTGAAGACTCCCTGAAGACAGATTCCAAAAGAAAAAAGAAATCTCGCAAGAAAAGCGCCGATATGGATAGCCGTGAGTTGAATGCAACCTTGAAACCTGAGCTCTTACATAATCAGCATTTAAAGCAGCAATCAAAAGATGACATTGATTTGGACAAGATAATGGAAGATTTTTGTGATATTGAACGTGCTTGTTCCATGATGCATGAGGACAATGATGGCAAAGTTCACGCACAATCAGACCCAAAACATGTTATCTCTGAAGACCTTGCAAAAGATGCAATACATGACTTCGTGAATCATATGATATTGAATGGGAAAGATCTGGTAGAAGATAGAAAATTCCTTTGCTCACAGGAACTCGTGGAAGCCCTTCGGGTTATAAGCTCAGATAAGGAATTGTCTCTCAGACTTCTGCACGACCCGAACTCTCACTTATTGAAATATATTCAGGAGGTTGAAAATGCTAAAGGGGGAAGTGACGAAGAATACAGTTCAATTACTAGCTCCAACTTATCCAAACAAGACCATGGAAATCTGAAACAAACTAGCGAGATTGTCAACCGCAAGCATCTTAAATTTTTGAGGAAGAAGGTAAAGTCTCAATCAAAAGGTCCAACAAATAAAAATGAGAAGAGCGAGTTTTCAAACAGAATTGTCATTCTGAAACCTGCGCTAACGGGCATGCAAAATTCTGAAAGTGAAAACAACCTTGCTTCATCACTGGAATCTCAGGATATTGTCCATTACAAAGGCCCTCCAGTAAGAGCAAGTTCACATTTTTCACTTAAAGAGATAAAGAAGAAATTAAAGCATGCTATCGGAAAGGAGAGGCATGGAAACCCTGAACTCGCTGCTGAACATAAAAAAAAGGAAGCAGGAGGCAAAGCCATTGGTAAAGCTAGTCTTGGAATGAGATCTCCTAGTAAAGAACATTTCTTCATTGAAAAGATTGCAAGACCTATGTTTGATGTTATGAAAGGAAACAAGACAAGTACATTGAAATACTCTGTGGAACATGAAAGTGATGCTCCCAAAGATAGGGTTTCTAACATATATATTGAGGCCAAGAAACATCTCTGTGAAATGCTGGATAATGGAGATGAGAACACAAGCATTTCAAGCAGGCAGATTCCCAAAACCCTTGGGAAAATTCTCTCACTTCCCGAGTACAGCTTTTCTCCTCTTGGAAGTCCTGCAAGGAATATGGAGCACCATTTTGTGACTGCACAGGCGAGATTTCCCACTTCAGATAAAACTTGTGAGGTTAATGAGGATAACTCTTCTCCCAAACAAGCAACCTCTACTGGTCATGTGGATCAGGAAACAGACAATTCAGAGAACCAGACAAGCATTTATGATGAAAGCTCTAAAATTGAAGTGCAAAAAATAAAGTCTGAGTCAACTCTCTCGCGTGATCCTGGTCAAGTTTATACTAATGAAGATAATTTAGAATCTACAGAAGAGAAAAGTGTTCTGGAATCTTCCAGGGATCCTACTGGCTTCATTGCAGGGAAGGACCAAAATAATGATATCTCACAAATTCCTGATAGTGCTAGATGTTCTGAATTTTTGAATGAGGATGTTGCAGAAGAGATCCAACCATCGTCACCACTCTCACCCCCTTCTCGCTCTTCCATCCCTAAGAAACTTGAAGAGCTACCAAGTCCTGTTTCTGTGCTCGATACACTGTTCACAGAAGATGACTTCAGCCCTGGGTTCTCCAGATGTCAACCTGTTAAATTATCAGCACAACCAATACAAATTCAATTTGAAGAACACGACTCTTCAACCACGGATCAATTTGATAGAGGAAAGTATCGTGTTGAAGAAAATGAATTGATATATGACTACATTAATGCTGTCTTTCATGCCTCTGGCTTGACTCGAGATCAATTGTTCATGAAATGCCTTTCCTCAGACAACATACTAGATCCTTCCCTGTTTGATCAGATTGAGTTCTTCTCAAATCTACTTCGACACGACCAGAAGCTCCTATTTGATTGCATCAATGAAGTTCTCATGGAGATTTGTTGGCATTACTTTGGGGTCTCGCCTTGGGCATCATTTGTAAATCCTAGCATTAGACCAACTCCAAGTATGAAGAAGGTTATTCTCAAGGTCTGGGAAGGAGTGTGCTGGCATGTCCTTCCCTTGCCCCCGCCACATACTTTGGAGCAAATTGTGAGGAAAGACATGGAGAGAAATGGAGCATGGATGGACCTTCGAGTTCATGCTGAAACAGTTGGTTTTGAAATGGGCGAGGTGATTCTCGCCGAACTGATCGAAGATACAATTTTGAGCCTTGTGAGTGAGGGTACAGAAAGTAGTTCTTTTCTGCTTCAATTTGAATTGAAGGACAATGAGAGGAGCACTGGCTGA 2751 0.4064 MPERSKRFPVQYEKDQSGCMWGFISIFDFRHGRSTWKLIADRSHSSRHAVGSILAKNKFETLSNLDEEYQGNFDRVESKRLTVTTDADKLSVKKLIEEEMFIDQDDVKDQVNAEVESKQSRSGREDSLKTDSKRKKKSRKKSADMDSRELNATLKPELLHNQHLKQQSKDDIDLDKIMEDFCDIERACSMMHEDNDGKVHAQSDPKHVISEDLAKDAIHDFVNHMILNGKDLVEDRKFLCSQELVEALRVISSDKELSLRLLHDPNSHLLKYIQEVENAKGGSDEEYSSITSSNLSKQDHGNLKQTSEIVNRKHLKFLRKKVKSQSKGPTNKNEKSEFSNRIVILKPALTGMQNSESENNLASSLESQDIVHYKGPPVRASSHFSLKEIKKKLKHAIGKERHGNPELAAEHKKKEAGGKAIGKASLGMRSPSKEHFFIEKIARPMFDVMKGNKTSTLKYSVEHESDAPKDRVSNIYIEAKKHLCEMLDNGDENTSISSRQIPKTLGKILSLPEYSFSPLGSPARNMEHHFVTAQARFPTSDKTCEVNEDNSSPKQATSTGHVDQETDNSENQTSIYDESSKIEVQKIKSESTLSRDPGQVYTNEDNLESTEEKSVLESSRDPTGFIAGKDQNNDISQIPDSARCSEFLNEDVAEEIQPSSPLSPPSRSSIPKKLEELPSPVSVLDTLFTEDDFSPGFSRCQPVKLSAQPIQIQFEEHDSSTTDQFDRGKYRVEENELIYDYINAVFHASGLTRDQLFMKCLSSDNILDPSLFDQIEFFSNLLRHDQKLLFDCINEVLMEICWHYFGVSPWASFVNPSIRPTPSMKKVILKVWEGVCWHVLPLPPPHTLEQIVRKDMERNGAWMDLRVHAETVGFEMGEVILAELIEDTILSLVSEGTESSSFLLQFELKDNERSTG* 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3087 916 Pfam Protein of unknown function (DUF3741) 223 267 IPR022212 -
Lja1g3087 916 MobiDBLite consensus disorder prediction 284 302 - -
Lja1g3087 916 PANTHER (, RELATED) 1 899 - -
Lja1g3087 916 MobiDBLite consensus disorder prediction 541 580 - -
Lja1g3087 916 MobiDBLite consensus disorder prediction 653 672 - -
Lja1g3087 916 MobiDBLite consensus disorder prediction 283 302 - -
Lja1g3087 916 MobiDBLite consensus disorder prediction 112 148 - -
Lja1g3087 916 MobiDBLite consensus disorder prediction 112 132 - -
Lja1g3087 916 MobiDBLite consensus disorder prediction 541 637 - -
Lja1g3087 916 MobiDBLite consensus disorder prediction 591 605 - -
Lja1g3087 916 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 899 - -
Lja1g3087 916 Pfam Domain of unknown function (DUF4378) 740 887 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3087 Lja-Chr1 37563419 37568994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3087 6 875 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 34.537 1.94e-107 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3087 - - gmx:100783243 1190.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3087 1 37563419 37568994 Lja1g3087 1 37563419 37568994 ECH
Lja1g3087 1 37563419 37568994 Lja3g1885 3 21607870 21613957 PCT