Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3083 ATGGATACAGAGGAAGCCCCTAAAATCCCCAGAAGATTAACCAGGTCTTTGGCTTCATGTTCATCATCCACTTCAAATATTGTACCTGCAGCAAAAGTAAATAACCTTGAACCTCTAACTATTGATGACCTTTTAGTTGGAGGAGGCCCCATTAGCCTAGGTGATGTAATTTCTAGTTATCCTTGTAGAAGTAACCAGATTCTTGAGATTATGCGTCTTTTGGGTCCTTTGAATTCACCAATGCCTCCTTTGTTTGTGTATGGAAGTGCTTCTACTGGAAAAAGTAGTGTCATTCTTCAAGTATTCAGGCATCTAAACAGACCCCTTATTTATTCTAGTTGTAGGACATGTTATAACCAGCGTATCTTGTTTGAGTCTATTCTAAATCAGTTGCTTCTCCATAGAAAAAATGCTGCCAATGGTTATTCTAATGTGAAGCGCTGTGAAAGACCATCTGATTTTGTCAATTTTCTCCGCGAAGCATTGACCAATGTTATAAACAATCTGAAAGAGAAGTCGATCTCAAATAAGACGAAACATGGAGGAATTGGGAATATGATCTACTTGGTATTTGATAATTTTCAGCTTGTTAGGGAGTGGGATAAGAACTCTACTATATTGCCCTTACTGTTTAATCTCTATGATCTGCTAAAGATGCCTGAGGTGGGTCTGATTTTTATCAGCAATACTTCCCCAGATACATTTTACTCTAACATGGGTTACGTGGATCCTATTCCCATTTACTTTCCTGATTACACAGAAGATGATATTCGTCAAATATTATTGAGAAACCAAACGAACCAGAAGTTGTATTCCTCATTTCTAGATGTAACTCTGAGGCCTTTCTGTAGAATTACTAGGCAGGTTGGTGAATTGACCACTGCTTTAAAGCCGCTATATGAAAAATATTGTGAACCTTTAAGTGACAGGGGAGTTGTTCCTAGTCAAGACATGATCCGAAGACTATTCAATCATATCAAGCCTCATATTGCCTCCTCTCTGAATGAGATATTTAAGGTTTCATCTCCTCTTTCAAATGAAGTTGAGAATGGTAAAGAGACAAAGCGGAAAGGGAGTCCCAAGAGATTGGAGCAATCTGAAGAAATTGGCAATCTTGATTTTCATATGTCTACTAGTGCTAAGTATCTCCTTATTTCAGCCTTTCTTGCCTCCAGAAACCCAGCTACTCTTGATGCTTCACTTTTTGATTCCAAAGGTGGTTCTGATAATCGAAAGCGAAAGCGGAAGCCCGCTGAGAAAGTGCTGAATAAGAAGGAAATTTTAGAAGAGGAACTACTGATGAAAGGACCCGGAACTTTCCCATTAGAGAGGTTGTTAGCCATCTTTCTATGTCTTGTATCAGTTGCAGAAGACCCGTCGGATGAAGAGGAACAAAGCAACTATGGATTAGGAGTTCCATGTGGCCATGATGAACTGATGTCTGACGTTCTTTTGCAACTTTCTAGCCTCTGCAATGCTAATTTTATATTTAAAGGAAGAAGCTGTCCAATAGAAGGCTCAATTCGGTATAGATCAACTATATCTGAAGACTTGGCTTTGAAGGTTGCAAGGAGCCTTAAGTTCCCATTATCTAAGTATTTGTATAGAAGATAG 1614 0.3885 MDTEEAPKIPRRLTRSLASCSSSTSNIVPAAKVNNLEPLTIDDLLVGGGPISLGDVISSYPCRSNQILEIMRLLGPLNSPMPPLFVYGSASTGKSSVILQVFRHLNRPLIYSSCRTCYNQRILFESILNQLLLHRKNAANGYSNVKRCERPSDFVNFLREALTNVINNLKEKSISNKTKHGGIGNMIYLVFDNFQLVREWDKNSTILPLLFNLYDLLKMPEVGLIFISNTSPDTFYSNMGYVDPIPIYFPDYTEDDIRQILLRNQTNQKLYSSFLDVTLRPFCRITRQVGELTTALKPLYEKYCEPLSDRGVVPSQDMIRRLFNHIKPHIASSLNEIFKVSSPLSNEVENGKETKRKGSPKRLEQSEEIGNLDFHMSTSAKYLLISAFLASRNPATLDASLFDSKGGSDNRKRKRKPAEKVLNKKEILEEELLMKGPGTFPLERLLAIFLCLVSVAEDPSDEEEQSNYGLGVPCGHDELMSDVLLQLSSLCNANFIFKGRSCPIEGSIRYRSTISEDLALKVARSLKFPLSKYLYRR* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3083 537 Gene3D - 60 238 IPR027417 -
Lja1g3083 537 MobiDBLite consensus disorder prediction 346 369 - -
Lja1g3083 537 MobiDBLite consensus disorder prediction 349 369 - -
Lja1g3083 537 Pfam Origin recognition complex (ORC) subunit 5 C-terminus 247 534 IPR020796 GO:0000808|GO:0005634|GO:0006260
Lja1g3083 537 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 5 55 536 IPR020796 GO:0000808|GO:0005634|GO:0006260
Lja1g3083 537 Pfam AAA ATPase domain 61 219 IPR041664 -
Lja1g3083 537 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 319 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3083 4 537 Core DNA Replication Machinery Family AT4G29910 57.895 0.0 630
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3083 K02607 - gmx:100784340 846.269