Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3056 ATGTCTATATATAATGCATGCTGTGTGCAGCTTGATTTATCCAATTTCAAAAAAACACCCACAACTACCAATGTACTTCCAGGTCCATGGAAGCTACCAATCATAGGAAATATGTTCCAACTCATTACACCTACACCACATCGAAAACTAAGAGACCTGGCCATAACACATGGACCCATCATGCATCTGCAACTTGGTGAGATCTTCACCGTCGTTGTTTCCTCAGCAGAGTATGCTAGGGAGGTGATGAAAACCCATGATATTATCTTTGCATCAAGGCCTCATCTTCTAGCAAGGAATGTATTATCTTATAACTGCACTGATATAGCCTTTTCACCTTATGGTAATTACTGGAGGCAGCTCCGGAAGATCTCCGCCATTGAGCTCTTAAGCACAAAACGGGTTAGATCTCTTTGGCCAATCAGAGAGAAAGAGATCTCTACCCTCATCAAATTGATTGCTTCAAAAGAAGGATCAGAAATCAATCTCACTGGAGAAGTTTATTCAACCATCTATACATTCTTTTCAAAGGCTGCATTTGGCAAGAAATATGCAGACCAAGAAGATTGGTTTCTACATATAGGAGACTATTTCCCTTCAGCTAAATGGCTTCAAAGCCTTTCTGGGATGAGACCTAAGCTTGAGAAGTTGCAGCAGATAATAGACAAGATAATGGAAAATATCATCAATGACCATAAGGAGGCAAGATTAAGAGCTAAAGAAGCTTTGGTTGAAGAAGAGGGAGATCTCATTGATGCTATCTTAAAATTTGGAGAGAGTGACAACAATGGCTTGGGTTTTCATTTAACTACAAATAATATCAAAGCTATACTCTTGGACTTCTTCAGTGCTGGGAGTGGAACTGCAATTACTACTATTATTTGGGCAATGACTGAGATGATGAAGGATCCTACAGTATTGAAGAAAACACAAATTGAAGTGAGAGAGGTGTTTGATAAGAGAGGAAAGATTGATGAAAGTGGTATTGAGGAGCTCAAATACTTTAAAGTAGTCATCAAAGAGGTCCTCAGGCTACACCCTCCTGCTCCTCTTCTTCTTCCAAGGGAATGTCAAGAAGCATGTGAGATTAATGGATTTAATATACCTGGTAAAAGCAGGGTCCTTGTTAATGCTTGGGCAATTGCAAGGGATCCTAAATATTGGCCTGAACCGGATAGGTTTTACCCTGAAAGGTTTATCAGTAGCTCTATTAACTTCATAGGAAATGATTTTGAGTATATCCCATTTGGTGCCGGAAAAAGAATTTGTCCAGGCATAAACTATGGAATGGCAAATGTTGAGCATGGTCTTGCATACTTACTGTATCATTTTGATTGGAGCCTACCCAAGGGAATGAAAACTGAGGACTTAAACTTGACAGAAGAATTTGGAGTTACTATGTCAAGAAAAGATGATCTATACTTGATTCCCACAGTTGCTCAAGTGTTGGCCCTTTTGACCCTTTTCCTATCCATGCTTGTTACCCTGGTGATGATAAGGAAGAATTTCGAAAAAACACACACAACTACAAATGCACTTCCAGGTCCATGGAAGCTACCAATCATAGGAAATATTCACCATCTTATTACATCTACACCACATCGAAAATTAAGAGACCTAGCCATAACACATGGACCCATCATGCATCTGCAACTTGGGGAGATCTTCACTATCGTTGTTTCCTCAGCAGAGTATGCTAGGGAGGTGATGAAAACCCATGATATTATCTTTGCATCAAGGCCTCGTCTTCTAGCCAGGGATATAATGTCTTATGACTGCACTGATTTAGCATTTTCACCATATGGTGATTATTGGAGGCAGCTCCGGAAGATCTCTGCCATGGAGCTCTTAAGCACAAAACGGGTTAGATCTCTTTGGCCAATCAGAGAGAAAGAGATCTCTACCCTCATTAAATTGATTGCTTCAAAAGAAGGATCAGAAATCAATCTCACTCAAGAAGTTGTTTCAACCATCTATACATTCTTTTCAAAGGCTGCATTTGGCAAGAAATATGCAGACCAAGAAGAGTTCATATTAGTGATAAAAGAACTTGTCAAGCTTTCAGTTGGTTTTTACATAGGAGACTATTTTCCTTCAGCTAAATGGCTTCAAAACCTTTCTGGGATGAGACCTAAGCTTGAGAAGTTGCGCCACCAATTAGACAAGATTTTGGAGAATATCATCAATGACCATAAAGAGGCAAGATCAAGAGCTAAAGAAGCTTTGGTGGAAGCAAAGGGAGATCTAATTGATGCTATCTTAAAATTTCAAGAGACTGACAGCAGTGACAGTAACTTGGATTTTCATTTAACTACAAATAATATTAAGGCTATAATCTTGGATTTCTTCAGTGCTGGGAGTGGGACTGCAATAACTACTATTATTTGGGCAATGACTCAGATGATGAGGCATCCTAACGTATTGAAGAAAACACAAGTTGAAGTGAGAGAGGTGTTTGATAAGAGAGGAAAGATTGATGAAAGTGGCATTGAGGAGCTCAAATACTTTAAAGCAGTCATCAAAGAGGTCCTCAGGCTACACCCTCCTGCTCCTCTTCTTCTTCCAAGGGAATGTAAAGAAGCATGTGAGGTTAATGGATTTAATATACCTGATAAAAGCAGGGTCATTGTTAATGCTTGGGCAATTGCAAGGGATCCAAAATATTGGCCTGAACCGGATAGGTTTTACCCTGAAAGGTTTATTGATAGCTCTATTGACTTCATAGGAACTAATTTTGAGTATATCCCATTTGGTGCCGGAAGAAGAATTTGCCCAGGCATGAACTATGGTATGGCAAATGTTGAGCAGGGTCTTGCATTCTTATTGTATCATTTTGATTGGGGGCTACCCAATGGAATGAAAAAAGAGGACTTAAACTTGACAGAAGAATTTGGAGTTACTATGTCAAGAAAAGATGATCTATACTTGATTCCCACAGTTGCTCGTCCTTTCAATTTGGGATTAGATAGTTCATCTAGCATTCTTAAGTTTAGTACCTTTGAATTCTAA 3009 0.3922 MSIYNACCVQLDLSNFKKTPTTTNVLPGPWKLPIIGNMFQLITPTPHRKLRDLAITHGPIMHLQLGEIFTVVVSSAEYAREVMKTHDIIFASRPHLLARNVLSYNCTDIAFSPYGNYWRQLRKISAIELLSTKRVRSLWPIREKEISTLIKLIASKEGSEINLTGEVYSTIYTFFSKAAFGKKYADQEDWFLHIGDYFPSAKWLQSLSGMRPKLEKLQQIIDKIMENIINDHKEARLRAKEALVEEEGDLIDAILKFGESDNNGLGFHLTTNNIKAILLDFFSAGSGTAITTIIWAMTEMMKDPTVLKKTQIEVREVFDKRGKIDESGIEELKYFKVVIKEVLRLHPPAPLLLPRECQEACEINGFNIPGKSRVLVNAWAIARDPKYWPEPDRFYPERFISSSINFIGNDFEYIPFGAGKRICPGINYGMANVEHGLAYLLYHFDWSLPKGMKTEDLNLTEEFGVTMSRKDDLYLIPTVAQVLALLTLFLSMLVTLVMIRKNFEKTHTTTNALPGPWKLPIIGNIHHLITSTPHRKLRDLAITHGPIMHLQLGEIFTIVVSSAEYAREVMKTHDIIFASRPRLLARDIMSYDCTDLAFSPYGDYWRQLRKISAMELLSTKRVRSLWPIREKEISTLIKLIASKEGSEINLTQEVVSTIYTFFSKAAFGKKYADQEEFILVIKELVKLSVGFYIGDYFPSAKWLQNLSGMRPKLEKLRHQLDKILENIINDHKEARSRAKEALVEAKGDLIDAILKFQETDSSDSNLDFHLTTNNIKAIILDFFSAGSGTAITTIIWAMTQMMRHPNVLKKTQVEVREVFDKRGKIDESGIEELKYFKAVIKEVLRLHPPAPLLLPRECKEACEVNGFNIPDKSRVIVNAWAIARDPKYWPEPDRFYPERFIDSSIDFIGTNFEYIPFGAGRRICPGMNYGMANVEQGLAFLLYHFDWGLPNGMKKEDLNLTEEFGVTMSRKDDLYLIPTVARPFNLGLDSSSSILKFSTFEF* 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3056 1002 Coils Coil 713 748 - -
Lja1g3056 1002 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 488 982 - -
Lja1g3056 1002 PRINTS E-class P450 group I signature 924 947 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3056 1002 PRINTS E-class P450 group I signature 657 675 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3056 1002 PRINTS E-class P450 group I signature 565 586 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3056 1002 PRINTS E-class P450 group I signature 794 820 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3056 1002 PRINTS E-class P450 group I signature 914 924 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3056 1002 PRINTS E-class P450 group I signature 774 791 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3056 1002 PRINTS E-class P450 group I signature 878 902 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3056 1002 PRINTS E-class P450 group I signature 837 855 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3056 1002 PRINTS E-class P450 group I signature 541 560 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3056 1002 Pfam Cytochrome P450 27 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3056 1002 Pfam Cytochrome P450 514 967 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3056 1002 SUPERFAMILY Cytochrome P450 514 978 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3056 1002 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 416 425 IPR017972 GO:0005506|GO:0016705
Lja1g3056 1002 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 917 926 IPR017972 GO:0005506|GO:0016705
Lja1g3056 1002 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 7 481 - -
Lja1g3056 1002 Coils Coil 225 245 - -
Lja1g3056 1002 PRINTS P450 superfamily signature 284 301 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3056 1002 PRINTS P450 superfamily signature 915 924 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3056 1002 PRINTS P450 superfamily signature 838 849 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3056 1002 PANTHER CYTOCHROME P450 71B11-RELATED 7 481 - -
Lja1g3056 1002 PANTHER CYTOCHROME P450 71B11-RELATED 488 982 - -
Lja1g3056 1002 Gene3D Cytochrome P450 16 475 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3056 1002 Gene3D Cytochrome P450 503 977 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g3056 1002 SUPERFAMILY Cytochrome P450 27 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3056 Lja-Chr1 37016296 37034685 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3056 521 979 Cytochrome P450 AT3G26210 41.970 1.26e-123 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3056 - - pvy:116136695 1060.44