Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3015 ATGATGGTAGGACTCAACAACAACAACAACAACAACAGCAACACCAACGTGAACAAAAGTGACAACAATAACAACAACAACGACAACAACAATTGTGATGGTGAAATCTTTGTCTCTGATGACAAAGGTGGAGACTTTCCGGGGTTTCCAGGAAAACGAAGCATCGCTGAGAGAAGGGGTTTCAATACCAATGCACCAAGGATCAACACTGCACTTTTTCGCACTGCGACTGTAGCCGCAACTGCAACAACCCCTTTGGTTTCTCCTTCTGCTCGATCACCTCGTATCACAATCCCTCCTGGGATTAGTCCTGCTGCATTGCTTGATTCCCCAATCTTGCTTCTCAATTCTCAGCCAATGCCATCTCCCACTACTGGGAGTTTCTTCATGCTGTCACCTTTCCCTCATGAAGAATCAATGGCCACTGCTGTTGCACTTGGACAAGGGAATATGGATGTGTCCTCTGCCTCTGATGCTGTTGCCTCCTCTGAATTCAAGGCTCATGCCAATTTGGATCCTAATTCTTTACCCCCTTACCCTGCTTCACTGAATCAGGTTCCTAGTAACTGCCACATGATGAAGGAAGGAAATCGGGGCAGCCAACTACTTGTTCAAGTTCAACCACCTTTAAATTTTCCATTCCCAGAAGATTTTCCGAAGGGCTATCCTGCAATAAATGGCGAGGTCCATTCCTACAATGATGTGAGCATGGTGAATGATAATGCCAATCATGTTGAGATGTCAGTCTCTCGTTCTGAGGAAGCTAGTGATGAAAGCACTCTGCCTGAAAATGCTATTGATGGCGAGGATACCGGACAGCAACTTGTTGTAGAAGAACAGAAAGAGACATCCCATGCGACCGGAGTCGTAAGGACCTCAGAAGATGGCTATAATTGGAGGAAATATGGACAAAAGCAGGTAAAAGGCAGTGAATATCCCAGGAGCTACTATAAATGTACTCAACCTAATTGTCAGGTCAAGAAAAAGGTTGAAAGATCCCATGATGGCCAAATAACTGAAATTATTTACAAGGGTGCTCATAACCATCCGAAACCACATTCTAGCCGTCGAACATCAGCACTTTCAAATGATGAGATTTCAGAAATTGCTGAAGCTGGTGAAACCTGTGTTAAAGTTGACTGTGATTCAGTCTGGGGAAATATTCACTCTGGAATGAGAGATACAAAGCACAGGTTGGCATGGAAGGCTGATGGTCAGGAAAGGACATCCTCAGCTTCTGCTATGACTGAGCTCGCAGATCCAATATCAACGAAGAGAGCTAAACCTGAATCGGAGGACACTCCAGAGTTTTCTTCTACACATGCTAGTCATGGTGGTGATGCAGATGGAGCCACTCAAGCAGTCATGTCACTTGAAGATGATGCTGAATCAGAGTCCAAAAGAAGGAAGAAGGAAAGCTACACTGTTGAAGCTATGCCTCCCAGGGCTGTTCGTGAGCCTCGAGTTGTAGTCCAAATTGAGAGTGAAATAGACATACTTGACGATGGTTATCGCTGGCGGAAGTATGGACAGAAAGTTGTCAAAGGAAATCCAAACCCAAGGAGCTACTACAAATGCACAAGTGCTGGATGTCCTGTAAGGAAACATGTGGAAAGGGCTTCCCATAATCTGAAATATGTTATCACTACTTATGAGGGAAAACACAATCATGAAGTGCCTACTGCTAGAAACAACAATCAGATAAGCTCAAATGATGGTGGTGGTGCTAATGGGCAAGCAGGTCTTACATTACATGGGAGTGCCAGTATCCCAAAGCCAGAACCTCATCAAACTCTAGCACCTCATTTTGATAGAAAACCTGATTTTAGCAATGAGTTTCTCAGGCAAGGTTTGATTGGAAGTTTGGGTAATGACCTGAAGTTTGGACCTTCCTCCATGAGCCAAATGAAGTACTCTTCCTTGAGTAATACCATGCCTTATGGCTCCTATGGACTGAATCCTGATCGTTGTGCCACCCCTGCTGGATCTATGGCCGCAATGTTCCCTGATTTTCCAATGCCGCTACCAATGAATCTTCCCTCATCTGGAAGTTTTCCTCTTGCTGGAATTAACTTTAACCGCATGAAACCGATGGGTCATGTCCAGTCTTTCCTTTCAGGGCAGCAGGTGAAGGAGATTGATTCAGGGTTCCTGAAGCCTAAACAGGAGCAGAAGGATGATACTATGTACACCACATGCATACCCTCTCTTGATCATGCAAATGCTTCTCTCAATCCGTCAACATCACCATCCATTTATCAGCGCGTCATGCAGAATTTCCCTTGA 2286 0.4475 MMVGLNNNNNNNSNTNVNKSDNNNNNNDNNNCDGEIFVSDDKGGDFPGFPGKRSIAERRGFNTNAPRINTALFRTATVAATATTPLVSPSARSPRITIPPGISPAALLDSPILLLNSQPMPSPTTGSFFMLSPFPHEESMATAVALGQGNMDVSSASDAVASSEFKAHANLDPNSLPPYPASLNQVPSNCHMMKEGNRGSQLLVQVQPPLNFPFPEDFPKGYPAINGEVHSYNDVSMVNDNANHVEMSVSRSEEASDESTLPENAIDGEDTGQQLVVEEQKETSHATGVVRTSEDGYNWRKYGQKQVKGSEYPRSYYKCTQPNCQVKKKVERSHDGQITEIIYKGAHNHPKPHSSRRTSALSNDEISEIAEAGETCVKVDCDSVWGNIHSGMRDTKHRLAWKADGQERTSSASAMTELADPISTKRAKPESEDTPEFSSTHASHGGDADGATQAVMSLEDDAESESKRRKKESYTVEAMPPRAVREPRVVVQIESEIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCPVRKHVERASHNLKYVITTYEGKHNHEVPTARNNNQISSNDGGGANGQAGLTLHGSASIPKPEPHQTLAPHFDRKPDFSNEFLRQGLIGSLGNDLKFGPSSMSQMKYSSLSNTMPYGSYGLNPDRCATPAGSMAAMFPDFPMPLPMNLPSSGSFPLAGINFNRMKPMGHVQSFLSGQQVKEIDSGFLKPKQEQKDDTMYTTCIPSLDHANASLNPSTSPSIYQRVMQNFP* 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3015 761 MobiDBLite consensus disorder prediction 557 604 - -
Lja1g3015 761 SUPERFAMILY WRKY DNA-binding domain 493 560 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lja1g3015 761 Pfam WRKY DNA -binding domain 501 558 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lja1g3015 761 Pfam WRKY DNA -binding domain 294 350 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lja1g3015 761 Gene3D WRKY domain 279 353 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lja1g3015 761 MobiDBLite consensus disorder prediction 423 437 - -
Lja1g3015 761 MobiDBLite consensus disorder prediction 400 450 - -
Lja1g3015 761 SMART WRKY_cls 293 351 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lja1g3015 761 SMART WRKY_cls 500 559 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lja1g3015 761 MobiDBLite consensus disorder prediction 1 38 - -
Lja1g3015 761 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 11 736 IPR044810 GO:0003700
Lja1g3015 761 MobiDBLite consensus disorder prediction 457 476 - -
Lja1g3015 761 ProSiteProfiles WRKY domain profile. 495 560 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lja1g3015 761 PANTHER WRKY TRANSCRIPTION FACTOR SUSIBA2-LIKE ISOFORM X1 11 736 - -
Lja1g3015 761 Gene3D WRKY domain 487 553 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lja1g3015 761 SUPERFAMILY WRKY DNA-binding domain 291 352 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lja1g3015 761 MobiDBLite consensus disorder prediction 460 476 - -
Lja1g3015 761 MobiDBLite consensus disorder prediction 560 577 - -
Lja1g3015 761 MobiDBLite consensus disorder prediction 1 34 - -
Lja1g3015 761 ProSiteProfiles WRKY domain profile. 288 352 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3015 Lja-Chr1 36532023 36536359 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3015 84 563 WRKY Transcription Factor Family AT4G26640 39.501 3.06e-93 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lja1g3015 WRKY 1.7e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3015 K18835 - gmx:100800211 979.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3015 1 36532023 36536359 Lja1g3015 1 36532023 36536359 ECH