Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2967 ATGGTTTTGAGTAGCCGAGTTTTCATTGCTCGTGTTATTGTTGGTTTCTTTCTGCTGATTGCATGTGGTGTGACATATGGGACTGAAAGTGATATCTCCTGCTTGAAAAGTGTGAAGGCTGAACTTGAAGACCCGTACAATTATTTGAATTCCTGGAGTTTCAATAACAAGACAGAAGGGTTTATCTGCAAGTTTACTGGGGTTGAATGTTGGCATCCTGATGAGAACAGGGTCTTGAATCTCAAACTGTCCAACATGGCACTCAAGGGCCAGTTCCCTCGTGGAATTCGAAATTGCTCGAGCTTAACAGGATTGGATTTGTCAAGTAACCGGCTCTCTAAAACCATTCCAGAAGATATATCTACCCTTGTCACCTTTGTGACATCCCTTGATCTATCTTCAAATGACTTCACTGGGGCAATCCCTGTGTCCCTTGCGAACTGTACCTATCTTAATACCCTCAGACTTGACCACAACCAACTCACTGGTCAAGTTCCTGCAGAATTAACTCAGCTCCCGCGGCTTAAGTCATTTTCTGTTTCCAATAATTATTTGACAGGACAAATTCCGACATTTAAAAGCGGTGTAACTTCAGCAGACAGTTATGCAAATAATACAGGCCTCTGTGGTGCTCCCTTGGATCTTTGCAAGGCTAAGTCTTCCAAGAGTAACACAGCAGTTATAGCTGGAGCAGCTGTTGGTGGTGTGACTCTTGGAGCATTAGGATTGATTGTTGGATCGCTGTTCTATGTGCGCCGTGTTTCTCATAAGAAAAAGGAAGAAGACCCTGAAGGAAACAAGTGGGCAAGAATGCTAAAGGGAACTAAAGCAATAAAGGTTTCTATGTTTGACAAATCAATTTCAAAAATGCGCTTTAGTGATCTCATGAAGGCTACTGATAACTTCAGTAAAAGCAATATTATTGGGTCTGGAAGATCAGGAACTGTGTACAAAGCTGTCCTTGGTGACGGCACATCGCTCATGGTTAAGAGATTGCAGGAGTCTCAACACTCAGAGAAAGAATTTCTGTCTGAGATGGCTATACTAGGGTCGGTCAGACATCGTAATTTGGTTCCTCTTTTAGGATATTGCCAGGCCAAAAAGGAGAGGCTTTTGGTTTATAAAAACATGCCAAATGGTACCCTCCATGATCAACTACATCCTGCGGCTGGCGAGTGCACCATGGAGTGGTCTCTAAGGCTCAAAATTGCAATTGGAGCAGCCAAAGGACTAGCATGGCTTCATCATAGCTGCAACCCCCGTATCATCCATCGAAACATAAGCTCTAAATGCATCTTGTTGGATGCAGATTTTGAGCCCAAAATTTCTGATTTCGGCCTTGCCAGATTGATGAACCCAATTGATACACATTTGAGTACATTTGTAAATGGTGAATTTGGTGATTTAGGTTATGTTGCTCCTGAGTATACAAAAACTTTGATGGCCACACCAAAAGGGGATGTTTATAGCTTTGGGACTGTGCTTCTTGAATTCGTGACAGGGGAAAGAGCTACACAAGTGGCTAAAGCTCCAGAAACTTTTAAAGGAAATTTGGTAGAATGGATTACACAGCTCACAAGCCATTCAAATCTCCGAGACGCCATTGACAAATCACTTCTTGGGAAGGGTGTTGATCAAGAGCTTTTCCAGTTTCTAAAGGTTGCATGCAACTGTGTGACGGAAGCTCCGAAGGAAAGACCCACCATGTTTGAAGTATACCAGCTTCTAAGAGCCATTGGGAGTAGATATAATTTCACAACTGAGGATGAGATTATGGTACCTGCTGATACTGATTATGCTGATAACTTAGAAGAGCTTATTGTAGCTCGAGAGGTAGTTGGATGA 1845 0.426 MVLSSRVFIARVIVGFFLLIACGVTYGTESDISCLKSVKAELEDPYNYLNSWSFNNKTEGFICKFTGVECWHPDENRVLNLKLSNMALKGQFPRGIRNCSSLTGLDLSSNRLSKTIPEDISTLVTFVTSLDLSSNDFTGAIPVSLANCTYLNTLRLDHNQLTGQVPAELTQLPRLKSFSVSNNYLTGQIPTFKSGVTSADSYANNTGLCGAPLDLCKAKSSKSNTAVIAGAAVGGVTLGALGLIVGSLFYVRRVSHKKKEEDPEGNKWARMLKGTKAIKVSMFDKSISKMRFSDLMKATDNFSKSNIIGSGRSGTVYKAVLGDGTSLMVKRLQESQHSEKEFLSEMAILGSVRHRNLVPLLGYCQAKKERLLVYKNMPNGTLHDQLHPAAGECTMEWSLRLKIAIGAAKGLAWLHHSCNPRIIHRNISSKCILLDADFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYTKTLMATPKGDVYSFGTVLLEFVTGERATQVAKAPETFKGNLVEWITQLTSHSNLRDAIDKSLLGKGVDQELFQFLKVACNCVTEAPKERPTMFEVYQLLRAIGSRYNFTTEDEIMVPADTDYADNLEELIVAREVVG* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2967 614 Gene3D Phosphorylase Kinase; domain 1 263 375 - -
Lja1g2967 614 Pfam Protein kinase domain 303 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g2967 614 PANTHER RECEPTOR-LIKE PROTEIN 55 5 590 - -
Lja1g2967 614 CDD STKc_IRAK 308 576 - -
Lja1g2967 614 Gene3D Transferase(Phosphotransferase) domain 1 377 598 - -
Lja1g2967 614 Pfam Leucine rich repeat 128 185 IPR001611 GO:0005515
Lja1g2967 614 Pfam Leucine rich repeat N-terminal domain 29 71 IPR013210 -
Lja1g2967 614 ProSiteProfiles Protein kinase domain profile. 302 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g2967 614 Gene3D Ribonuclease Inhibitor 28 217 IPR032675 -
Lja1g2967 614 SUPERFAMILY Protein kinase-like (PK-like) 280 576 IPR011009 -
Lja1g2967 614 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Lja1g2967 614 PANTHER LRR RECEPTOR-LIKE KINASE 5 590 - -
Lja1g2967 614 SUPERFAMILY L domain-like 28 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2967 Lja-Chr1 36060113 36063232 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2967 17 590 Receptor kinase-like Gene Family AT3G28450 46.392 0.0 524
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Lja1g2967 Pkinase 8.3e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2967 - - gmx:100801294 985.326