Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2965 ATGGATTCACTGAGCATCCTCCTCTCTTCTTATCCACTCTGCAACCAAAACCACTTCAAAACCCACAAACCCTTCTCTCCTCTCTCAAACCACACTCCACACCACTCTGCAACTCAACCTCTTGCATCTTCTTCTTCCACCAAGAAAAACCTCTTCAAAAATCCAATCCTTTCACTCTCTTTGATCAACCTCTTCACCCCATTTCCATCCCTCGCTGTTGAACCCTCAGCACCCACTCTGGTTGACTCAGAAGCAGGCAAAATCAGCTTGGAAACGGTTCTGGTTACCATTGATGATTTTTTCAACCGGTACCCATTTTTCGTTGCTGGGTGTACCTTCATCTGGCTGATTGCGATTCCTCTGGCGGAGGAGTATTTCAAGAAATGCAAGTTTGTGTCGGCCATTGATGCGTTCAGGAAGCTCCGGGATGACCCTGATTCGCAGCTTCTGGATATAAGGGATGGGAAGAGTGTGAGGTTTCTGGCGTCACCTAATTTGAAGATGTTGAAGAAGGAAGTGGTGCAGGTTGAGTTCAGTGAGGGGAATGAAGATGGGTTTGTGAGGAAGGTTTTGGAGAGGTTCAAGGATGCGCCAAACACTGTTGTATGTGTTTTGGACAGTTTTGACGGTAATTCCATGAAAGCTGCTGAGTTACTATTCAAGAATGGTTTCAAAGAGGCCTATGCTATTAAAGGTGGAGTCAGAGGCCAGCAAGGGTGGATGGCTATACAGGATACCCTTTTGCCCCCTTCTCTGCATATGTATCGAAGGAAAAAGACTAAAGCTTCACAAAAACTCAGTACAAATGGAAATGGAGCCATTCAGAAAAATGATAGTAAAAACGAGAGTTCCTTGTCCCTAGAAGTTCCCACAGTTGAAAACCAAAAGACAGAAAATGGTCATGTGAAAAGGTCTGTAGAGTCTGGGCCAGAAATGAGAACTGGTTCACGAGCTTCCTCTTCTCTGTATCCTAATTACCCAGATTTGAAGCCACCATCATCTCCAACTCCATCAAAGCCACAATAG 1026 0.4503 MDSLSILLSSYPLCNQNHFKTHKPFSPLSNHTPHHSATQPLASSSSTKKNLFKNPILSLSLINLFTPFPSLAVEPSAPTLVDSEAGKISLETVLVTIDDFFNRYPFFVAGCTFIWLIAIPLAEEYFKKCKFVSAIDAFRKLRDDPDSQLLDIRDGKSVRFLASPNLKMLKKEVVQVEFSEGNEDGFVRKVLERFKDAPNTVVCVLDSFDGNSMKAAELLFKNGFKEAYAIKGGVRGQQGWMAIQDTLLPPSLHMYRRKKTKASQKLSTNGNGAIQKNDSKNESSLSLEVPTVENQKTENGHVKRSVESGPEMRTGSRASSSLYPNYPDLKPPSSPTPSKPQ* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2965 341 ProSiteProfiles Rhodanese domain profile. 143 249 IPR001763 -
Lja1g2965 341 Gene3D - 127 251 IPR036873 -
Lja1g2965 341 CDD RHOD 138 236 - -
Lja1g2965 341 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC 1 341 IPR044240 -
Lja1g2965 341 MobiDBLite consensus disorder prediction 264 296 - -
Lja1g2965 341 MobiDBLite consensus disorder prediction 257 341 - -
Lja1g2965 341 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4A, CHLOROPLASTIC 1 341 - -
Lja1g2965 341 MobiDBLite consensus disorder prediction 312 327 - -
Lja1g2965 341 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 114 240 IPR036873 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2965 97 241 Sulfurtransferasese or Rhodanese AT4G01050 40.541 1.94e-26 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2965 - - lja:Lj1g3v2894990.2 637.491