Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2935 ATGCTAATGGCTCGTTCAATCTTATACCTTCACCTTCTGGTCTCATCTTTTCTTTTTTCAGTTTCAGTGTTGAGTGCTGTTCAGGCCAGCAAAAAGTGTTACATTGTATACTTGGGAGCACATTATCATGGTCCAACACCTTCCTCTGGTGATCTTGAAACTGCCACATCTTCTCATTATGATTTACTGAGTTCAGTCTTCGGAAGCCATGAGAAGGCCAAAGAAGCAATTCTTTATTCATATAATAAACACATCAATGGCTTTGCTGCTTTACTTGAACAGGAAGAAGCAGCAGATATTGCAAAAAAACCAAATGTAGTATCTGTGTTTGTGAGCAAGGAGTATAAACTGCACACAACCCGTTCATGGGAGTTTCTTGGACTGGGTGGGAATGCTAATGGAAATGGTAAGACCACAGCATGGCAAAAAGGAAGATTTGGTGAAAACACCATCATAGGTAGCATTGATACAGGTGTTTGGCCTGAATCCCAGAGTTTTAGTGACAAAGGAATTGGCCCTGTCCTTGCAAAATGGCGTGGTGGTAACATCTGTCAGATTAACAAGCTACGAGGTTCAAAGCAAGTTCCATGTAACAGGAAGCTAATTGGAGCAAGATTCTTCAACAAAGCTTATGAAGAAGCCAAGGGCAAACTTCCCCAAAAGCAGCAAACAGCACGTGACTTAGTAGGTCATGGAACACACACATTATCAATAGCTGCTGGAAATTTTGTTCCTGGTGCACAAGTATTTGGTAATGGTAATGGCACAGCAAAGGGTGGATCTCCAAGAGCAAGAGTTGCATCCTACAAAGTGTGTTGGTCTCTAACCGATCCTGCAAGTTGCTATGGTGCAGATTTGTTGGCTGCTATTGACCAAGCCATAAGCGATGGTGTTGATGTGATTTCTGTATCTGCTGGAGGCAGAGATTCTATCAGTTCTACAGAAATTTTCACTGATGAAATTTCCATAGGGGCATTCCATGCACTTGCCAAAAATATATTATTAGTTGCATCTGCAGGGAATGATGGACCAACACCTGGAACTGTCTTGAATGTGGCTCCATGGGTGTTCACAGTTGCTGCTAGCACCATAGATAGAGAGTTCAGAAGTACCGTAATTGTTAATGACAATAACCAACAAACTACGAGCACGGGAGGAAGTCTTTTTGTGAACTTACCACCCAATCAATCTTTTTCTCTGATCCTTTCAACTGATGCTAAACTTGCCAACGCAACAAATCGAGACGCTCAACTTTGTAGACCTGGAACACTTGACCCTGCAAAAGTAAAAGGAAAAGTAGTAGTATGCACTCGAGAAGGAAAAATAAAATCAGTTGCAGAGGGTCAGGAAGCTCTATCTGCAGGTGCAAAGGGAATGATTTTGAATAATCAAAAGCAAAATGGAAATACACTTCTTTCAGAGCCTCATGTTTTGTCTTCCGTGAGCCGTCCACAACCTCCTCCACCAAAAACAAGAAGCACCAAGAGTGCTAGCACAACTGTGAGGATGTCCCAAGCTAAAACACTTCTTGGAAGAAGGCCAGCTCCGGTTATGGCTTCATTCTCCTCTAGAGGACCCAACCAAGTCCAGCCATCAATACTCAAGCCTGATGTAACTGCCCCTGGTGTGGACATACTAGCCGCCTATTCACTATTTGCAAGTGCATCTAACCTGTTATCAGATAAACGTCGAGGGTTTCCATTTAATGTACTACAAGGAACTTCCATGTCTTGCCCTCATGTCACTGGTATTGCTGGACTCATTAAGACACTTCATCCTAATTGGAGTCCAGCCGCTATTAAATCAGCAATCATGACCACAGCAAGTACAAGAGATAACACCAACAGGCCTATACGAGATGCGTTTGATAAAACATTAGCAACTCCATTTGCTTATGGTTCAGGACATGTTCAACCTAACAGTGCAATTGATCCTGGGCTTGTTTATGATCTAAGCATTGTTGATTACTTGAACTTCTTATGTGCTTCTGGATATGACCAACAAACCATTTCAGTACTCAACAATAAGACATTTACTTGTTCAGGATCCCACAGCATAACAGATTTTAACTACCCTTCAATCACATTACCAAACATTATGTCTAGTGTGGTAAATGTTACCCGCACAGTCACCAATGTTGGGCCACCAAGCACGTATTTTGCCAATGTCCAATTGCCTGGACATAAAATTGTTGTTGTTCCAAATTCCTTGAGTTTCAAGAAAATTGGTGAAAAGAAGACATTCCAAGTTATTGTGCAGGCAACGAGTGTAACTCGACGGAGAAAATACATATTTGGGGATTTGCGATGGACAAATGGAAGACACATAGTCAGGAGTCCCATTACAGTTCGACACATATGA 2361 0.4193 MLMARSILYLHLLVSSFLFSVSVLSAVQASKKCYIVYLGAHYHGPTPSSGDLETATSSHYDLLSSVFGSHEKAKEAILYSYNKHINGFAALLEQEEAADIAKKPNVVSVFVSKEYKLHTTRSWEFLGLGGNANGNGKTTAWQKGRFGENTIIGSIDTGVWPESQSFSDKGIGPVLAKWRGGNICQINKLRGSKQVPCNRKLIGARFFNKAYEEAKGKLPQKQQTARDLVGHGTHTLSIAAGNFVPGAQVFGNGNGTAKGGSPRARVASYKVCWSLTDPASCYGADLLAAIDQAISDGVDVISVSAGGRDSISSTEIFTDEISIGAFHALAKNILLVASAGNDGPTPGTVLNVAPWVFTVAASTIDREFRSTVIVNDNNQQTTSTGGSLFVNLPPNQSFSLILSTDAKLANATNRDAQLCRPGTLDPAKVKGKVVVCTREGKIKSVAEGQEALSAGAKGMILNNQKQNGNTLLSEPHVLSSVSRPQPPPPKTRSTKSASTTVRMSQAKTLLGRRPAPVMASFSSRGPNQVQPSILKPDVTAPGVDILAAYSLFASASNLLSDKRRGFPFNVLQGTSMSCPHVTGIAGLIKTLHPNWSPAAIKSAIMTTASTRDNTNRPIRDAFDKTLATPFAYGSGHVQPNSAIDPGLVYDLSIVDYLNFLCASGYDQQTISVLNNKTFTCSGSHSITDFNYPSITLPNIMSSVVNVTRTVTNVGPPSTYFANVQLPGHKIVVVPNSLSFKKIGEKKTFQVIVQATSVTRRRKYIFGDLRWTNGRHIVRSPITVRHI* 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2935 786 SUPERFAMILY Subtilisin-like 118 647 IPR036852 GO:0004252|GO:0006508
Lja1g2935 786 ProSitePatterns Serine proteases, subtilase family, serine active site. 573 583 IPR023828 -
Lja1g2935 786 ProSiteProfiles Serine proteases, subtilase domain profile. 122 643 - -
Lja1g2935 786 Pfam PA domain 416 470 IPR003137 -
Lja1g2935 786 Pfam Subtilase family 147 614 IPR000209 GO:0006508|GO:0008236
Lja1g2935 786 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 21 784 - -
Lja1g2935 786 Gene3D - 660 786 - -
Lja1g2935 786 Gene3D Peptidase S8/S53 domain 150 656 IPR036852 GO:0004252|GO:0006508
Lja1g2935 786 CDD PA_subtilisin_like 372 481 - -
Lja1g2935 786 PRINTS Subtilisin serine protease family (S8) signature 572 588 IPR015500 -
Lja1g2935 786 PRINTS Subtilisin serine protease family (S8) signature 147 166 IPR015500 -
Lja1g2935 786 PRINTS Subtilisin serine protease family (S8) signature 227 240 IPR015500 -
Lja1g2935 786 CDD Peptidases_S8_3 115 609 IPR034197 -
Lja1g2935 786 Pfam Peptidase inhibitor I9 34 118 IPR010259 -
Lja1g2935 786 Gene3D - 365 510 - -
Lja1g2935 786 Pfam Fibronectin type-III domain 688 783 IPR041469 -
Lja1g2935 786 MobiDBLite consensus disorder prediction 478 501 - -
Lja1g2935 786 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 118 IPR037045 -
Lja1g2935 786 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 21 784 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2935 Lja-Chr1 35626375 35638047 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2935 34 784 Subtilisin-like Serine Gene Family AT2G04160 51.507 0.0 744
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2935 - - gmx:100803751 1209.51