Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2932 ATGGCTCGTTCAATCTTATACCTTCATCTTCTGGTCTCATCTTTTCTCTTTTTGGTTTCAGTGCTGAGTGCTGTTCATGTTAGCAAAAGGTGCTACATTGTATACTTGGGAGCACATTCTCATGGTTCAAGACCTTCCTCTGTTGATCTTGAAACTGCCACATCTTCTCATTATGAATTACTGGGTTCAGTCTTGGGAAGCAATGAGAAGGCCAAAGAAGCAATTATTTATTCATATAATAAACACATCAATGGATTTGCAGCTTTACTTGAGGAGGAAGAAGCAGCTCAGATTGCAAAAAAACCAAATGTAGTATCTGTGTTTTTGAGCAAGGAGCATAAACTGCACACTACCCGTTCATGGGAGTTTCTTGGGCTGGGTAGAAATGGTATTGGAAATGGTGGGAACACAGCATGGCAAAAGGGAAGATTTGGTGAAAACACAATCATAGGTAGCATTGATACAGGTGTTTGGCCTGAATCAAAGAGTTTTAGTGACATAGGAATAGGTCCTGTCCCTGCAAAATGGCGTGGGGGTAACACCTGTGAAATCAACAAACTCCAAGGTTCAAAGAAAGTTCCATGTAACAGGAAGCTAATTGGAGCAAGAATCTTCAACAAAGCTTATGAATCATCCAACGGCAAACTTCCCCCAAGTCAACAAACAGCACGTGACTTCGTAGGCCATGGAACACACACATTATCAATAGCTGCTGGCAATTTCGTTCCTGGTGCACAAGTATTTGGTAATGGTAATGGCACAGCAAAAGGTGGATCCCCAAGAGCTAGAGTTGCATCCTACAAAGTGTGCTGGTCTCTAACTGATGATGCTAGTTGCTACGGTGCGGATGTGTTGGCTGCTATTGAACAAGCCATAAGCGATGGTGTTGATGTGATTTCGGTGTCTGCTGGAGGCAGAGATTCTATCAGTCCTACAGAAATTTTCACTGATGAAGTTTCCATAGGAGCATTCCATGCACTTGCCAAAAATATATTATTAGTTGCATCTGCAGGAAATGATGGACCAACACCTGGAACTGTCTTGAATGTGGCTCCATGGGTGTTCACAGTTGCTGCTAGCACCATCGATAGAGAGTTCAGCAGTACTATAACTATTAGTAACAGCAGTGGACAAACTACAGACACGGGAGCCAGTCTTTTCGTGAACTTGCCGCCTAACCAATCCTTTACCCTGATCAGTTCTACCGATGCTAAACTTGCCAACGCGACAAATCGAGATGCTCAACTTTGTAGACCTGGAACACTTGATCCTGCAAAAGTAAACGGCAAAATAGTGGTATGCGTTCGAGAAGGAAAAATAAAATCAGTTGCTGAGGGTCAGGAAGCTCTATCTTCTGGTGCACAGGGAATGGTTTTAAGTAATCAACAGCAAAATGGAAATACACTTCTTTCTGAGCCTCATGTTTTGTCTACAGTGGGGGGCCCAAAAAATCATGGAATAACAACAGTTGCAACGAATTCTACAATAACGATGTCCCAAGCAACAACACTTCTTGGAAGAAGGCCAGCTCCAGTTATGGCTTCATTCTCATCTAGAGGACCCAACCAAGTCCAGCCATCAATACTCAAGCCTGATGTAACTGCGCCTGGTGTGAACATACTAGCTGCCTATTCACTATTCGCTAGTGCATCTAACCTATTATCAGACAATCGTCGAGGGTTTCCATTTAATGTACTACAAGGAACTTCCATGTCTTGCCCTCATGTTTCTGGTATTGCTGGACTAATTAAGACACTTCATCCTAATTGGAGTCCATCTGCTATTAAATCAGCAATCATGACCACAGCAAGTACAAGAGATAACACCAACAGGCCTATACAAGACGCGTTTGATGAAACATTAGCAACACCATTTGCTCATGGTTCAGGACATGTTCAACCTAACAGTGCAATTGATCCTGGGCTTGTTTATGATCTAAGCATTGTTGATTACTTGAACTTCTTATGTGCTTCTGGATATGACCAACAACTCATTTCAGTACTTAACAAGAAGACATTTACTTGTTCAGGATCTCACAGCATAACAGATTTTAACTACCCTTCAATCACATTACCGAACATTGAGTCTAATGTGGTCAATGTTACCCGCACCGTCACCAATGTTGGGCCACCAAGCACATATTTTGCCAATGTCCAATTGCCTGAACATAAAATTGTTGTTATTCCTAATTCCTTGACTTTCCAGAAAATTGGTGAAAAGAAGACCTTCCAAGTTATTGTGCAAGCAACGAGTGTGACTCAACAGAGAAAATACCTATTTGGGGATTTGCAATGGACAAATGGAAGACACATTGTCAGGAGTCCCATTACAGTTCGACACATATGA 2346 0.4203 MARSILYLHLLVSSFLFLVSVLSAVHVSKRCYIVYLGAHSHGSRPSSVDLETATSSHYELLGSVLGSNEKAKEAIIYSYNKHINGFAALLEEEEAAQIAKKPNVVSVFLSKEHKLHTTRSWEFLGLGRNGIGNGGNTAWQKGRFGENTIIGSIDTGVWPESKSFSDIGIGPVPAKWRGGNTCEINKLQGSKKVPCNRKLIGARIFNKAYESSNGKLPPSQQTARDFVGHGTHTLSIAAGNFVPGAQVFGNGNGTAKGGSPRARVASYKVCWSLTDDASCYGADVLAAIEQAISDGVDVISVSAGGRDSISPTEIFTDEVSIGAFHALAKNILLVASAGNDGPTPGTVLNVAPWVFTVAASTIDREFSSTITISNSSGQTTDTGASLFVNLPPNQSFTLISSTDAKLANATNRDAQLCRPGTLDPAKVNGKIVVCVREGKIKSVAEGQEALSSGAQGMVLSNQQQNGNTLLSEPHVLSTVGGPKNHGITTVATNSTITMSQATTLLGRRPAPVMASFSSRGPNQVQPSILKPDVTAPGVNILAAYSLFASASNLLSDNRRGFPFNVLQGTSMSCPHVSGIAGLIKTLHPNWSPSAIKSAIMTTASTRDNTNRPIQDAFDETLATPFAHGSGHVQPNSAIDPGLVYDLSIVDYLNFLCASGYDQQLISVLNKKTFTCSGSHSITDFNYPSITLPNIESNVVNVTRTVTNVGPPSTYFANVQLPEHKIVVIPNSLTFQKIGEKKTFQVIVQATSVTQQRKYLFGDLQWTNGRHIVRSPITVRHI* 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2932 781 ProSitePatterns Serine proteases, subtilase family, serine active site. 568 578 IPR023828 -
Lja1g2932 781 SUPERFAMILY Subtilisin-like 115 642 IPR036852 GO:0004252|GO:0006508
Lja1g2932 781 CDD PA_subtilisin_like 382 479 - -
Lja1g2932 781 Pfam Subtilase family 145 608 IPR000209 GO:0006508|GO:0008236
Lja1g2932 781 Gene3D - 363 505 - -
Lja1g2932 781 Pfam Peptidase inhibitor I9 32 116 IPR010259 -
Lja1g2932 781 Pfam Fibronectin type-III domain 683 778 IPR041469 -
Lja1g2932 781 PRINTS Subtilisin serine protease family (S8) signature 145 164 IPR015500 -
Lja1g2932 781 PRINTS Subtilisin serine protease family (S8) signature 567 583 IPR015500 -
Lja1g2932 781 PRINTS Subtilisin serine protease family (S8) signature 225 238 IPR015500 -
Lja1g2932 781 ProSiteProfiles Serine proteases, subtilase domain profile. 120 638 - -
Lja1g2932 781 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 20 779 - -
Lja1g2932 781 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 116 IPR037045 -
Lja1g2932 781 Gene3D Peptidase S8/S53 domain 148 651 IPR036852 GO:0004252|GO:0006508
Lja1g2932 781 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 20 779 IPR045051 -
Lja1g2932 781 CDD Peptidases_S8_3 113 604 IPR034197 -
Lja1g2932 781 Gene3D - 655 781 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2932 Lja-Chr1 35586766 35593187 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2932 29 779 Subtilisin-like Serine Gene Family AT5G59810 52.694 0.0 748