Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2931 ATGACAAGAACTCTCTCAAATGATAGTGCCTTCATTAATGGTTGCTACATTGTATACCTGGGAGCACATTCTCATGGTCCAACACCTTCCTCTGTTGATCTTGAAACTGCCACATCTTCTCATTATGATTTACTGGGTTCAGTCTTGGGAAGCCATGAGAAGGCCAAAGAAGCAATTCTTTATTCATATAATAAACACATCAATGGATTTGCAGCTTTACTTGAAGAGGAAGAAGCAGCACGGATTGCAAAAAATCCAAAAGTAGTATCTGTGTTTGTGAGCAAGGAGCATAAATTGCACACTACCCGTTCATGGGAGTTTCTTGGACTGCGAGGAAATGGTGGGAATTCAGCATGGCAAAAGGGGAGATTTGGAGAAAATACAATCATAGCTAACATCGATACAGGTGTTTGGCCTGAATCCCAGAGTTTTAGTGACAAAGGAATTGGTTCTGTTCCTGCAAAATGGCGTGGGGGTAACATCTGTCAAATTAACAAGCTCCGAGGTTCAAAGCAAGTTCCATGTAACAGGAAGCTAATTGGAGCAAGATTCTTTAGCAAAGCTTTTGAGGCATATAATGGCAAACTTCCCCCAACACAACAAACAGCACGTGACTTAGTAGGCCATGGTACCCACACACTATCAATAGCTGGTGGAAATTTCGTTCCTGGAGCACAAGTATTTAGTAATGGTAATGGCACAGCAAAAGGTGGATCACCAAGAGCACGAGTTGCAACCTACAAAGTGTGCTGGTCGCTAACCGATCCAGCTAGTTGCTATGGCGCGGATGTGTTGGCGGCCATAGACCAAGCCATAAGCGATGGTGTTGATGTGATTTCTGTATCTGCTGGAGGAAGATCTTTTATCAGTGCTGAAGAAATTTTCACTGATGAAGTTTCCATAGGATCATTTCATGCACTTGCCAAAAATATATTAGTAGTTGCTTCTGCAGGGAATGATGGACCTGCACTTGGAACTGTGTTGAATGTGGCTCCATGGGTGTTTACTGTTGCTGCTAGCACCATTGATAGAGAGTTCAGCAGTACTATAACTTTGGGTAACAACCAACAAATTACGGGAGCCAGTCTTTTTGTGAACTTGCCACCTAACCAATTATTTTCTTTGATCCTTTCAACTGATGCTAAACTTGCCAATGCAACCAATCGAGACGCTCAACTTTGTAGACCTGGAACACTTGACCCTGCAAAAGTAAAAGGCAAAGTAGTGGTATGCACTCGAGGTGGAAAAATAAAATCAGTAGCTGAGGGCAGTGAAGCTCTATCTTCTGGTGCAAAGGGAATGGTTCTGAGTAATCAAAAGCAAAATGGAAACACACTTCTTTCTGAGCCTCATGTTTTGTCAACCGTGAACACTGCAAAAGTTCCTGGATCAAAAACAACACCTGGTGGCGCTGGCATAACTGCTACGGACTCTACAATAAATTCATCCACTACATTAAAGTTGTCCCCAGCAAAAACATTCCTTGGAAGAAAGCCAGCTCCAGTTATGGCTTCATTCTCATCTAGAGGGCCAAATAAAATTCAACCAGCAATACTAAAGCCTGATGTAACTGCACCTGGTGTGAGCATACTCGCTGCGTATTCACCATTTGCAAGTGCATCTAACTTATTATCAGACACTCGTCGGGGGTTTCCATTTAATGTACTGCAAGGAACTTCCATGTCTTGCCCTCATGTTGCTGGTATTGCTGGACTTATTAAAACACTTCATCCTAATTGGAGTCCGGCCGCTATCAAATCAGCAATCATGACGACAGCAAGCACAAGAGATAACACCAATAAGCCGATACGAGATGCTTTCAACAAAAAATTGGCAACCCCATTTGCTTATGGTTCAGGGCATGTTCAACCTAACAGTGCAATAGATCCTGGGCTTGTTTATGATCTAAGCATTGTTGATTACTTGAACTTCTTATGTGCTTCTGGATATGACCAACAACTCATTTCAGCACTAAACTTCAACAAGACATTTACTTGTTCAGGATCTCACAGCATAACAGACTTGAACTACCCTTCAATCACATTACCAAACATCAGGTCAAATGTGGTAAATGTTACTCGCACAGTCACCAATGTTGGGCCACCAAGCAAGTATTTTGCAAATGCACAATTGCCAGGACATAAAATTGTTGTTGTTCCAAATTCCTTGAGTTTCAAGAAAATTGGTGAAAAGAAGACATTCCAAGTTATTGTGCAGGCAACGAGTGTGACTCAAAGGAGAAAATACCTATTTGGGAAATTGCAATGGACAAATGGAAGACACATAGTTAGGAGTCCCATTACAGTTCGACACATATGA 2319 0.4191 MTRTLSNDSAFINGCYIVYLGAHSHGPTPSSVDLETATSSHYDLLGSVLGSHEKAKEAILYSYNKHINGFAALLEEEEAARIAKNPKVVSVFVSKEHKLHTTRSWEFLGLRGNGGNSAWQKGRFGENTIIANIDTGVWPESQSFSDKGIGSVPAKWRGGNICQINKLRGSKQVPCNRKLIGARFFSKAFEAYNGKLPPTQQTARDLVGHGTHTLSIAGGNFVPGAQVFSNGNGTAKGGSPRARVATYKVCWSLTDPASCYGADVLAAIDQAISDGVDVISVSAGGRSFISAEEIFTDEVSIGSFHALAKNILVVASAGNDGPALGTVLNVAPWVFTVAASTIDREFSSTITLGNNQQITGASLFVNLPPNQLFSLILSTDAKLANATNRDAQLCRPGTLDPAKVKGKVVVCTRGGKIKSVAEGSEALSSGAKGMVLSNQKQNGNTLLSEPHVLSTVNTAKVPGSKTTPGGAGITATDSTINSSTTLKLSPAKTFLGRKPAPVMASFSSRGPNKIQPAILKPDVTAPGVSILAAYSPFASASNLLSDTRRGFPFNVLQGTSMSCPHVAGIAGLIKTLHPNWSPAAIKSAIMTTASTRDNTNKPIRDAFNKKLATPFAYGSGHVQPNSAIDPGLVYDLSIVDYLNFLCASGYDQQLISALNFNKTFTCSGSHSITDLNYPSITLPNIRSNVVNVTRTVTNVGPPSKYFANAQLPGHKIVVVPNSLSFKKIGEKKTFQVIVQATSVTQRRKYLFGKLQWTNGRHIVRSPITVRHI* 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2931 772 SUPERFAMILY Subtilisin-like 99 632 IPR036852 GO:0004252|GO:0006508
Lja1g2931 772 Gene3D - 645 772 - -
Lja1g2931 772 ProSitePatterns Serine proteases, subtilase family, serine active site. 558 568 IPR023828 -
Lja1g2931 772 ProSiteProfiles Serine proteases, subtilase domain profile. 104 628 - -
Lja1g2931 772 CDD Peptidases_S8_3 97 594 IPR034197 -
Lja1g2931 772 Pfam Peptidase inhibitor I9 16 99 IPR010259 -
Lja1g2931 772 PRINTS Subtilisin serine protease family (S8) signature 205 218 IPR015500 -
Lja1g2931 772 PRINTS Subtilisin serine protease family (S8) signature 125 144 IPR015500 -
Lja1g2931 772 PRINTS Subtilisin serine protease family (S8) signature 557 573 IPR015500 -
Lja1g2931 772 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 5 100 IPR037045 -
Lja1g2931 772 Gene3D Peptidase S8/S53 domain 128 641 IPR036852 GO:0004252|GO:0006508
Lja1g2931 772 Pfam Fibronectin type-III domain 674 769 IPR041469 -
Lja1g2931 772 CDD PA_subtilisin_like 349 456 - -
Lja1g2931 772 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 9 770 IPR045051 -
Lja1g2931 772 Pfam Subtilase family 125 600 IPR000209 GO:0006508|GO:0008236
Lja1g2931 772 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 9 770 - -
Lja1g2931 772 Gene3D - 343 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2931 Lja-Chr1 35573500 35581358 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2931 16 770 Subtilisin-like Serine Gene Family AT5G59810 53.604 0.0 762
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2931 - - gmx:100803751 1253.04