Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2912 ATGGATCCCTTTAAAGGACAAGGAGGCATTCAGATGCTGCTAACTGCTGAACAAGAAGCCCAACACATTGTTTCTAATGCAAGAAATTTGAGGACTCAAAGGTTGAAGCAGGCAAAAGAAGAGGCAGAGAGGGAGGCAGCTCAATACAGAACTCATATGGAAGAAGAATATCAAAAGTCAATTTCAGAGAATACTGGGAGCTCTGGATCTAATGTAAAAAGGCTTGATCAAGAGACAGAGGCCAAGATTAGAAATTTAAAGAAATCAGCATCAAAGGTCAACACAGAAGTTGTTGACATGCTACTCAAGTATATTACAAACATCAAAACATAA 333 0.3874 MDPFKGQGGIQMLLTAEQEAQHIVSNARNLRTQRLKQAKEEAEREAAQYRTHMEEEYQKSISENTGSSGSNVKRLDQETEAKIRNLKKSASKVNTEVVDMLLKYITNIKT* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2912 110 MobiDBLite consensus disorder prediction 37 76 - -
Lja1g2912 110 Coils Coil 32 59 - -
Lja1g2912 110 Gene3D - 3 110 - -
Lja1g2912 110 Pfam Vacuolar (H+)-ATPase G subunit 7 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Lja1g2912 110 TIGRFAM V_ATP_synt_G: V-type ATPase, G subunit 8 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Lja1g2912 110 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 1 110 IPR005124 GO:0016471|GO:0046961|GO:1902600
Lja1g2912 110 MobiDBLite consensus disorder prediction 37 59 - -
Lja1g2912 110 MobiDBLite consensus disorder prediction 60 74 - -
Lja1g2912 110 PANTHER V-TYPE PROTON ATPASE SUBUNIT G3 1 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2912 Lja-Chr1 35217949 35218676 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2912 8 108 Primary Pumps ATPases(2) AT4G23710 53.465 3.71e-33 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2912 K02152 - gmx:100818549 184.882