Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2908 ATGGGACTGGGTGGTGCTACTCATTCTTCCTCTTCTTCATCTTATTGCTCCCGTTTTTGGTCGTCGGCGCTCCGCTCCAAGCTCCTCGTCTCGCCGGCGGAGAAGGCTGCTCGTGACAGCTCCGGCAGGGGACTCTCCCGCCGGCTTGGTGTCCTCGACCTCCTGCTCCTTGGAATCGGCGCTTCCATTGGTGCCGGCATCTTCGTCCTCACCGGAACCGTTGCCCGCGACACCGGACCCGGAGTAACAATAAGTTTTGTACTTGCGGGAACATCCTGTGTTATAAATGCACTCTGTTTTGCTGAGCTAGCTTCTCGATTTCCTGCTGTTGCTGGAGGGGCATATCTATATGCATATACTGCTTTTAATGAACTTACAGCTTTTCTTGTTTTTGCACAATTAATACTCGACTATCATATTGGAGCAGCTACTGCAGCAAGAAGCTGTGCAAATTATTTGGTAACAATTCTAGAGCTCTTCCCCGTTCTCAAAGATAACATTCCAAAATGGATTGGACATGGTCAAAACATTGGAAACGTGCTATCCATCAATGTCTTAGCTCCAATTCTTGTACTGCTTCTCACTTTTATTCTCTGTCGGGGTGTTCAAGAATCATCAGTTGTGAATTCGTTTATGACAGTGACCAAGGTGGTCATCGTTATTATTGTCATTTTTGCTGGAGCTTTTGAGGTTGATGTTTCGAACTGGTCTCCCTTTGCTCCAAATGGTATGAAAAGCATATTTACAGGAGCTACTGTAGTCTTCTTTGCATATGTTGGATATGATGCAGTTGCCAATGCTGCTGAAGAATCTAAGAGACCACAGCGCGATTTGCCGATAGGCATAATCGAAAGCCTCTTGGTATGTCTTGCGTTGTACATTGGTGTATGCTTAGTGATTACAGGAATGGTTCCATACAATCTCCTAGGAGAAGATGCTCCATTGGCTGAAGCTTTTGAATCTACAGGGTTAAAATTTGTTTCGGTTCTGATTAGCATTTGTGCTATTGCTGGACTTACGACAACACTCCTTGTTGGTCTCTATGTTCAGTCTCGGCTATATCTTGGGCTTGGCAGGGATGGTTTACTACCCGCAATATTTGCTAAAGTTCACTCCAAACGCCACACTCCCATTCATTCTCAGATTTGGGTTGGCTGTGTTGTCAGTGTTTTGGCTGGACTGTTGAATGTGCACATGCTCTCACACATTCTTTCTGTTGGTACACTTACTGGCTATTCAGTTGTTTCGGCATGTGTTGTTGTACTTCGCTGGAAGGATAAGACAACTGGTCAAGTATCATCTTCAGCAAAGAGGGAAGGTGTAATTTGCCTTATTGCTGTTGCTGTTTCTGGATTTATTGGGGGGCTCTTTTTCCGCTATGATGCTTCACCTATTTTGTTGATTCTGGCTATACTTATTGGAGCTGGTGCTTCTGCTGCTCTTCATTTCCGCCAGGTTTATGCAGCAGATTCACCAGGGTTTTCTTGCCCTGGGGTTCCCCTTGTGCCAAATGTTTGCATCTTTTTCAACATGTTCTTATTTGCCCAGTTACATCATGAAGCATGGCTGAGATTTGTGATTATTAGTGTTGTTATGGTTGGTTTTTATGCAATATATGGGCAGTATCATGCTGACCCCAGTGCAGAGGAGAATGCTGTTTATCATGAGGCACCAGAGGAAGAAACTTGA 1689 0.4488 MGLGGATHSSSSSSYCSRFWSSALRSKLLVSPAEKAARDSSGRGLSRRLGVLDLLLLGIGASIGAGIFVLTGTVARDTGPGVTISFVLAGTSCVINALCFAELASRFPAVAGGAYLYAYTAFNELTAFLVFAQLILDYHIGAATAARSCANYLVTILELFPVLKDNIPKWIGHGQNIGNVLSINVLAPILVLLLTFILCRGVQESSVVNSFMTVTKVVIVIIVIFAGAFEVDVSNWSPFAPNGMKSIFTGATVVFFAYVGYDAVANAAEESKRPQRDLPIGIIESLLVCLALYIGVCLVITGMVPYNLLGEDAPLAEAFESTGLKFVSVLISICAIAGLTTTLLVGLYVQSRLYLGLGRDGLLPAIFAKVHSKRHTPIHSQIWVGCVVSVLAGLLNVHMLSHILSVGTLTGYSVVSACVVVLRWKDKTTGQVSSSAKREGVICLIAVAVSGFIGGLFFRYDASPILLILAILIGAGASAALHFRQVYAADSPGFSCPGVPLVPNVCIFFNMFLFAQLHHEAWLRFVIISVVMVGFYAIYGQYHADPSAEENAVYHEAPEEET* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2908 562 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 9 561 - -
Lja1g2908 562 Pfam Amino acid permease 49 458 IPR002293 GO:0016020|GO:0022857|GO:0055085
Lja1g2908 562 Gene3D Amino acid/polyamine transporter I 45 484 - -
Lja1g2908 562 PANTHER CATIONIC AMINO ACID TRANSPORTER 9, CHLOROPLASTIC 9 561 - -
Lja1g2908 562 Pfam C-terminus of AA_permease 494 543 IPR029485 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2908 Lja-Chr1 35165022 35170590 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2908 4 486 Organic Solute Cotransporters AT1G05940 67.828 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2908 K03294 - gmx:100804988 857.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1691 2 16946263 16948575 Lja1g2908 1 35165022 35170590 PCT