Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2887 ATGGACACAATCACCTGGATAACTCCGCTGGTTCTCTTCACCGTCACCTTCACACTGTTTCTTGCCAACACAATCAAACCAAACCACAAGAACAACAAGAAGCTTCCTCTTCCTCCAGGACCAAAGGGTTTCCCCATAGTTGGAAACCTTCTCCAAATTGGCCAAAAGCCCCACCAAACCTTTGCCACTCTCGCCAACACCTATGGCCCCATCATGAAACTCAAGCTTGGCCAAATCACCACCATAGTCATGTCCTCTCCCGACACCGCCAAATCAGTGCTCCAAGTCCACGACAACTTCTGTTGCAACAGAACCGTCCCAGACGCCATGAAAGCCGCTGAACATGACCGTTACAACATCGCATTCCTCCCGGCTTCGCACCGCTGGAGAGACCTCAGGAAAATCTGCAACAACCTCTTATTCTCCACCAAAAGCCTCGACGCCAGCGAGCAATTAAGGCGCCACAAGATTCTAGAACTCTTTGATGATATCAAAGAGAGCATGCTGAAGGGTGAAGCTGTTGATATTGGAAAGCTGGTTTTTAAGACCAACTTAAACTTGATTTCAAACACTGTTTTTTCTGTGGATTTGGCTCACTCTGCGGACAAAGCTGGGGAGTTTAAGGAGCTTGTGTCGAGTATTTTTGAAGATATTGGAAAGCCTAACTTGGCGGATTATTTTCCATTATTGAAGGTGGTTGATCCTCATGGAATAAGGAGGCGCACTGAGAGTTATTTTGAGAGGTTGTTGAAGATCTTGAAGGGGTTGATGGAGGAAAGGGTGAAGCAGAGGAAAGAGAGTGGTTACTGCACCAAAAGTGACATGTTGGATGCCATGCTAGATGATGCTGAACAGAACGGTTTGGAGATGTACAAAGATAAGATTGAGCGTTTATCATTGGACTTGTTCATCGCAGGAACTGACACTGTGACATCTACTATAGAATGGGGAATGGCAGAGTTACTTCGTAATCCAAAAGTTATGTCAAAAGCAAAAGTAGAACTTGAGCAAAATATTGGCAAAGGAAACCTAGTTGAAGAATCAGACATTGGGAGACTCCCTTACTTGCAAGCAATATTGAAAGAGACTTTCCGGTTGCACCCGATAGGTCCATTTTTGATCCCTCGACAAGCCGAAATGGATCTAGAGATGCATGGTTATATGATCCCAAAGGGTGCACAACTGATTGTGGGCAATCGGGAGGGATCCTAA 1212 0.4546 MDTITWITPLVLFTVTFTLFLANTIKPNHKNNKKLPLPPGPKGFPIVGNLLQIGQKPHQTFATLANTYGPIMKLKLGQITTIVMSSPDTAKSVLQVHDNFCCNRTVPDAMKAAEHDRYNIAFLPASHRWRDLRKICNNLLFSTKSLDASEQLRRHKILELFDDIKESMLKGEAVDIGKLVFKTNLNLISNTVFSVDLAHSADKAGEFKELVSSIFEDIGKPNLADYFPLLKVVDPHGIRRRTESYFERLLKILKGLMEERVKQRKESGYCTKSDMLDAMLDDAEQNGLEMYKDKIERLSLDLFIAGTDTVTSTIEWGMAELLRNPKVMSKAKVELEQNIGKGNLVEESDIGRLPYLQAILKETFRLHPIGPFLIPRQAEMDLEMHGYMIPKGAQLIVGNREGS* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2887 403 Gene3D Cytochrome P450 23 400 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g2887 403 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g2887 403 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g2887 403 PANTHER CYTOCHROME P450 FAMILY PROTEIN 9 397 - -
Lja1g2887 403 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g2887 403 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g2887 403 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g2887 403 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g2887 403 SUPERFAMILY Cytochrome P450 38 397 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g2887 403 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 9 397 - -
Lja1g2887 403 Pfam Cytochrome P450 38 397 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2887 Lja-Chr1 34904905 34910631 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2887 1 397 Cytochrome P450 AT2G45550 41.935 2.90e-114 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2887 - - lja:Lj2g3v0039250.1 502.671