Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2859 ATGGAAGAGAAACATAACAACAATTCATATCATGAGCTACGGTTTACCAAAGATGAGGACAAAGCTATAGCCACTGCTCCTCCTACCACAGATAGTAAGATGTCTTTCTTTCACACGTGTTTCAACGGACTCAATGCAATATCAGGTATTGGGATACTCTCAGTTCCACTTGCTCTAGCATCCGGAGGGTGGTTGAGCTTATTTCTTCTATTTGTCGTTGCGGCCGTAACCTTCTATACAGGATTGCTGATAAAAAATTGCATGGATAAGAATTCGAATATTAGAACCTATGCTGATATAGGTGAGCTTGCATTTGGAAAGATAGGAAGATTGATAGTAACAATATCCATGTATGCAGAGCTCTTCTTGGTTGCAACAGGCTTCTTGATTCTTGAAGGCGATAATTTGAGTAACTTATTTCCTATTGGGAAGCTTCAAGTGGCTGGTTTAGAAATTGGTCAAAAGCATTTCTTTATAGTAATGGTTGCTCTTGTTATTTTGCCCATAGTTTGGATGAATAACTTGAGTCTACTCTCTTATATATCTGCAAGTGGTGTGTTTGCTACTGCTATCATCATCTTATCAATATTATGGACTGCAACATTTGATGGAGTTGGTTTTCATCAAAAGGGAACTCTTGTTCATTGGAATGGAATCCCAACAGCTGTTAGCTTGTACACCTTTTGTTTCTGTGCACATCCACTCTTCCCCACCATATATAATTCTATGGGAAACAAACATCAGTTCTCAAATGTCTTACTTGTATGCTTTATCATAGCCACTGTAGGTTATGCGTCCATGGCTATGATTGGTTACACAATGTTTGGCGGAGGAGTTGAATCACAAGTAACCTTAAACCTGCCACTAGACAAAATAAGCTCAAGAATAGCAATATATACTACATTGGTCAATCCCATATCCAAATATGTTTTGATGACAACACCAATTACCAATGCTTTGAAAGATTTGCTTCCAAGGGGATACAATAGCAAAGTCACAGACATCATAGTTAGCGCTATCTTGGTCATGAGCACTGTCATTGTTGCCCTAGCTGTTCCTTTCTTTGGGTATCTCATGTCACTAGTTGGAGCACTTCTAAGTGTCACAGCTTCTATTCTACTTCCATGCTTGTGCTACTTAAAGATTTCATGCAATTACAACAAATTTAGGTTTGAGACAATAACCATAGTGGTAATACTATTATCAGGTATAGCAATAGGAATGTCTGGGACATACATGTCACTCAATAAAATAGTTCATCATATGTCATAG 1272 0.3805 MEEKHNNNSYHELRFTKDEDKAIATAPPTTDSKMSFFHTCFNGLNAISGIGILSVPLALASGGWLSLFLLFVVAAVTFYTGLLIKNCMDKNSNIRTYADIGELAFGKIGRLIVTISMYAELFLVATGFLILEGDNLSNLFPIGKLQVAGLEIGQKHFFIVMVALVILPIVWMNNLSLLSYISASGVFATAIIILSILWTATFDGVGFHQKGTLVHWNGIPTAVSLYTFCFCAHPLFPTIYNSMGNKHQFSNVLLVCFIIATVGYASMAMIGYTMFGGGVESQVTLNLPLDKISSRIAIYTTLVNPISKYVLMTTPITNALKDLLPRGYNSKVTDIIVSAILVMSTVIVALAVPFFGYLMSLVGALLSVTASILLPCLCYLKISCNYNKFRFETITIVVILLSGIAIGMSGTYMSLNKIVHHMS* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2859 423 Pfam Transmembrane amino acid transporter protein 33 412 IPR013057 -
Lja1g2859 423 PANTHER AMINO ACID TRANSPORTER AVT1J 33 419 - -
Lja1g2859 423 PANTHER OS05G0424000 PROTEIN-RELATED 33 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2859 Lja-Chr1 34371265 34373396 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2859 35 419 Amino Acid or Auxin Permease AAAP Family AT3G28960 57.772 3.25e-160 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2859 K15015 - gmx:100794374 607.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2859 1 34371265 34373396 Lja1g2859 1 34371265 34373396 ECH