Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2858 ATGGAAGAAAAACATGGCAACTATTCCTATGAGCTACGTTGTGCCACAGATGCGGAGAAAACTATTGTCACTTCCCCTCCTACCACAAATTGTAACGTGTCTTTCTTTCGCACGTGTTTTAACGGACTCAATGCAATATCAGGTGTTGGGATACTTTCGATTCCATTTGCTCTAGCATCCGGAGGGTGGTTAAGCTTAATTCTTCTATTTGTTATTGCTGTTGTAACCTTTTACACAGGCTTGTTGATAAAGAATTGTATGGACAAGAATGCGAATATTAGAACCTATGCTGATATAGGTGAGCTTGCATTTGGAAAGATAGGAAGACTAACAGTAACAATATCCATATACACCGAGCTCTTCTTGGTTTCAACAGGCTTCTTGATTCTTGAAGGAGATAATTTGAGTAACTTATTCCATATTGGGGAGATTCAAGTGGCTGGATTAGCAATTGGTCGAAAACATTTCTTTGTAGTACTGGTTGCTCTTGTTATCTTGCCTACAGTTTTCATGAACAACTTGGGTCTACTTTCTTACATATCTGCAAGTGGTGTGTTTGGGACTGGTATCATCATCTTATCAATATTATGGACTGCAACATTTGATGGAATTGGTTTTCATCAAAAGGGAACTCTTGTTCATTGGAATGGAATCCCAACAGCTATTAGCTTGTACACCTTCTGTTTTGGTGCACATTCACTCTTCCCTACTCTATATAATTCCATGAGAAACAAACATCAGTTTTCTAGTGTCTTACTTGTATGCTTTATTCTAGCCACCATTGGTTATGCATCCATGGCTATAATTGGTTACCTAATGTTTGGTGGAGAAGTTGAATCACAAGTAACCTTAAACCTACCACTAGACAAAATAAGCTCAAGAATAGCAATATATACAACGTTGGCCAATCCCATATGCAAGTATGCTTTGATGATAACACCAATTAAGATTGCTTTGAAAGATTTGCTTCCAAGGAGGTACAAGAATAAAGTCACTGACATCCTAGTTAGCACTATTCTTGTGATCAGCACTGTCATTATTGCTCTCACGATTCCTTTCTTTGGGTATCTCATGTCCTTAGTTGGAGCACTTCTAAACGTCACAACTTCTATTCTACTTCCATGCTTGTGCTACTTCAAAATTTCACAGAGTTACAAGAAATTTAGGTTTGAGACAATAGCCATAGTGGTAATAGTATTGTTAGGTATAACAATGGGAATATCTGGAACATACATGTCACTCAATGAGATAGTCCATCATTTGTAA 1266 0.376 MEEKHGNYSYELRCATDAEKTIVTSPPTTNCNVSFFRTCFNGLNAISGVGILSIPFALASGGWLSLILLFVIAVVTFYTGLLIKNCMDKNANIRTYADIGELAFGKIGRLTVTISIYTELFLVSTGFLILEGDNLSNLFHIGEIQVAGLAIGRKHFFVVLVALVILPTVFMNNLGLLSYISASGVFGTGIIILSILWTATFDGIGFHQKGTLVHWNGIPTAISLYTFCFGAHSLFPTLYNSMRNKHQFSSVLLVCFILATIGYASMAIIGYLMFGGEVESQVTLNLPLDKISSRIAIYTTLANPICKYALMITPIKIALKDLLPRRYKNKVTDILVSTILVISTVIIALTIPFFGYLMSLVGALLNVTTSILLPCLCYFKISQSYKKFRFETIAIVVIVLLGITMGISGTYMSLNEIVHHL* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2858 421 Pfam Transmembrane amino acid transporter protein 34 411 IPR013057 -
Lja1g2858 421 PANTHER OS05G0424000 PROTEIN-RELATED 32 418 - -
Lja1g2858 421 PANTHER AMINO ACID TRANSPORTER AVT1J 32 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2858 Lja-Chr1 34364681 34367714 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2858 34 418 Amino Acid or Auxin Permease AAAP Family AT3G28960 58.808 1.65e-162 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2858 K15015 - gmx:100786627 592.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2858 1 34364681 34367714 Lja1g2858 1 34364681 34367714 ECH