Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2830 ATGCGGCTTCTTCCTCTGTTCCAATCACTCCCCAAAACCACTCACTACTCCTTGAGGTTTGCATCAACTGCACTTGCCCACGTTGATTCACCATCTTTCTCAGACACCCCACCTCGTGTCCCTGAGCTTCACAAGGACACCTCCAACGTGCTCCAAACGCTTCACCGTCTGCACAACCGCCCTTCTCTTGCTCTTTCCTTCTTCACTCAGCTCAAGCAACAGGGGGTGTTCCCTCACACCACTTCAACCTACGCCGCCATTATCAGGATCTTGTGCTACTGGGGATTGGACAGGAGGTTGGATTCTGTCTTCCTTGACCTCATTGCACTTTCCAAACAAGACCCATCATTTGAAATCCATGACTTGTTTGAAGAGCTTTTGGAGGGGGATGAGGGTGTTGATAGGAAACCCCACTTGCTCAGAGCATTTGATTGGTATGTTAAATCTTGTGTCAGTCTTAACATGTTTGAAGAGGCTTATGATTTCTTGTTTCTAACTAGGAGGCGTGGGATTCTGCCTAGTATTTGGACTTGTAACTTTCTCATCAACCGGTTGGTTGATCATAATGAAGTGGAGAGGGCTTTGGCCATTTATAAGCAGCTCAAGAGGCTTGGTTTGAGCCCCAACAATTACACCTATGCCATTGTTGTCAAGGGACTGTGTAGGAAAGGTTACTTGGAAGAGGCGGAGCACATGTTAAAAGAAATGGATGAAGCTGGGGTGAATCTTGATTCCCATTGTTGTGCAGCTTTAATTGAGGGCATTTGCAATCATTGTAGTTCTGATTTGGGATATGAAGCGCTCCAAAAATTCAGAATGATGAATGCCCCTATAGAGGATCATGCCTACGCCGCTGTTATTCGTGGGTTTTGTAATGAAATGAAATTAGATGAAGCGGAGATTGTTGTTTTGGACATGGAAAGCCAGGGATTGGTTCCTGACGTGCGTATTTATTCTGCATTGATCTATGGATATTGTAAGAATCGTAATCTACACAAAGTTTCAGAGTTATGTAGTCAAATGACTTCAAAGGGTATAAAAACAAATTGTGTAGTTGCTAGCTACATCCTTCAATGTCTTGTTGAGATGGGCAAGACCTCAGAAGTGGTAGATATGTTTAAAAGATTGAAAGAATCAGGTATGTTTCTCGATGGGGTAGCTTATAATATTGTGTTTGATGCTTTATGTAGATTAGGCAAAGTGGACGATGCAATAGAAATGCTGGAAGAGATGAGAGTGAAGAACATCGATTTAGATGTTAAACACTACACAACCCTTATTAAGGGGTATTGCCTTCAGAATAAGCTCTTAGATGCCTCGGATATGTTTAGTGAAATGATAAAAAAAGGTTTTGCACCTGATATTGTCACATATAATGTACTAGCTGCTGGGTTGTCTAGAAATGGCTGTGCTTGTGTGGCAATTGACAATTTGAAAGCTATGGAAGAACAAGGAGTGAAGCCAAACTCAACTACACACAAGTTGATCATTGAAGGTTTATGTTCAGAAGGCAAGGTTGGAGAAGCTGAGACATACGTTAACATTCTAGAAGATAATGGATTTAAACCTGATATTGTGATATATAATGTACTAGTTGCTGGGTTGTCTAAAAATGGCCATGCTTGTGGGGCAATTGGCAAATTGGATGATATGGAGAAACAAGGTGTGAAGCCTAACTCAACTACACACAAGTTGATCATTGAAGGTTTATGTTCAGAAGGCAAGGTTGTAGAAGCTGAGGCATATTTTAACCGTCTGGAAGATAAAGGTGTGGAAATCTATTCTGCGATGGTGAATGGCTATTGTGAAGCATACCTTGTCGAAAAATCGTATGAACTTTTCCTTGAGCTGTCAGACCATGGGGATATTGCAAAAGAAGATTCTTGTTTCAAGCTACTTAGTAACCTCTGTTTGGCAGGTCACATTGACAAAGCTATGAAGTTGCTGGACAAAATGTTGTCATTTAAGGTGGAACCTAGCAAAATAATGTATTCTAAAGTATTAGCTGCTTTGTGCCAGGCTGGGGATATAAAACAGGCTTGCTCTTTGTTTGATTTTTTGGTTCGGAGAGGATCTACTCCTGATGTTCAAATGTACACAATTATGATAAATAGTTTATGTAGGATGAATTACTTGAAAGAGGCCCATGACCTCTTCCAGGATATGAAGAGGAGAGGGATCAAACCTGATGTCATTGCCTACACAGTCTTACTTGATGGGAGCTTTAAAAATGGAGCGACATCGGATGTTCTCACCATCTGGGGTGATATGAAGCAAATGGAAACAAGTCCAGATGTTATTTGTTACACTGTTTTGATTGATGGACTCATAAAGACAGATGACTGTGTAGATGCAATTAACCTATATGAAGACATGATTCACAATGGACTAGAACCAGATACGGTAACATACACTGCTATGATTTCTCTCTTCTGTAAAAGAGGTCTCGTGAAGGAAGCTTCTGAATTGCTTGATGAAATGTCTTCAAAGGGAATGACACCAAATTGGAAAGAGAAGAGCTATGCAGTTTGCAGATTGATTACCAGGATGTATTTGTATTTAGGTATCTATTTCAAAATCATTTGGATATGGTGGACACTCCCACAACTCTGGTTTCAATTTCTGCACTCTGGCGCTGCTTGGCGAGCTTGTCCCCACTTTATGTTTGTGAAGATGTACACATCAAGGAAGAAAATCTACAAGGGTAAGGATGCTGATCCTACTGAGTTTGAAGAGTTAGTCGAGCAGGGACTTTTTGATCTGGAAGATACCTATCAGGAACTTGTCAGTGACCTTGAGAAGAAGTTTAGTGGCAAGGATGTAATTTTGATTGCCACCCGGAGGATATTGAGGCCACCAATGAAGGGTTTTATTGTTCAACGTCCCTGCACGCAAACCCTTAGAGCTGTTTATGAAGCAATGCTGGAGGATATCGTGTTGTCTGCTGAGATTGTTGGGAAGCGTGTGAGGTACCGAGTTGATGGATCCAAGATTATGAAGGAAAAACATCAATGCGTTCATAGATTACAAATTAGACGTCAGATCTCACCTGAACTCTACAAAGAAATTCAAGAATCCACGATTTACGTCATCATTTTCTCTGAAAACTATGCTTCTTCCTCGTGGTGTTTGAATGAACTTGTGAAGATTTGTGAATGCAAGAAGATATATCATGATCAAAGGCATGTGATACCTATTTTCTACAAGGTGGAACCAGCAACTGTTAGGCATCAGAAGAAAGGGAGCTATGCAGATGCGTTTGTTAAGCATGAAAAGCGCTTTCCAGAGGAAGTAATACAGAGCTGGAAGGATGCACTAGCCGAAGCAGCTGATCTCTCCGGTTGGGATTCAAATGCGACCAGACCAGAATCCAAGCTTATTGATGGTATTGTGGAAGATATTTTAACAAAATTGGATCGTTCTTTCTCAAGTGATCATACTCAAGGAATGGTTGGAATTGAAGAGCATATTTCACAAATCCAGCCCTTGTTGCAACTTGAATCAGTGGGCGATGTTCGGATCATAGGAATTTGGGGCATGGGAGGAATAGGTAAAACTACGCTGGCTAAGGCACTACATAAGAAACTGGCGACCCAATTCAGTTCCACTAGCTTGATTGAGAATGCTCAACAAGAAATAGAAAGAGTTGGAACATCTATTCTACGTAAAACATACTTATCCGAGCTTTTAGATGAAGTCTATACATCACGTTTATTAGATGAAATGCTCAAACGGGCAAGGGTTCTTGTTATTCATGATGACATGAAAGATTCGAGTCAAGTTCAAGAATTAATTGGAGGGCGTGAAAACTTCGGCCCGAGCAGTAGAATCATTGTGACTAGCAGAGACTTGCAGGTGCTTAAGAATGCTGATGCTGATGAAATATATGAAGTCAAGGAGATGAATTTCCAAGATTCTCTACAACTCTTCAGTATAAATGCCTTTAAACCAAACTACCGTGTACAAGTTGATGCACGCTTGGTAGAAAAGGTATTAAAATATGCTAAAGGGGTTCCATTAGCTCTCAAAGTTTTAGGCAATTTGCTTTACGGTAGAGCAGAACAAGTATGGAAAAGTCAGTTGGAAAAGCTGGAAAAGCTTCCCGGTCCTCAGATTTTCAATGTGTTGAGATTAAGTTATGATGGGCTGGATGATGAACAGAAGGACATATTTCTTGACATAGCTTGCTTCTGTGCAATCCGTCGTGTGTTATATGTTGAAGTAGTGGAAATGCTAGATGGTTGTGGTTTCTCTATTGACATTGGAATGGATGTTCTCAGAGATAGGGGCCTTCTATCTATTTCTGAAGATTATATCGAGATGCATGATCTAATCCGGGAAATGGGAGTAGAAAACAATGTGTCAATGATCCTGGAAAACGCAGTCGGGACTGATGAAGTCCAGTGTATATTCCTCGACATGTGCAAAATAAAAAAAGATCAACTGCAATCTGAAGTTTTCAAAAGCATGCCTAATCTGAGAATGCTTTATTTCCATAGGAATTTTTTTAAAGGGGAATGTCTACCAAATGAGATCCTTCCTGCATTGCTTGAAAGTCTTCCGGATGGTTTAAAAGTTCTTCATTGGGAAGACTTTCCTCTAAGATCTTTGCCGCTCAAATTTTTTCCAGAAAATCTTGTTAAACTTTATATGCATGATAGTCATCTTGAACAACTTTGGTGGGGCAATAAGGAATTACCAAATTTGAAAATCATTGATCTTAGTTATTCTTCTTCCTTGATTGGAATATCAAGCCTTTCTAAGTCCCTATGTATTGAAGAAATAATTCTCGTTGGTTGTGTATCCCTTACAAGCCTTCCAAGCGACATGTGCAAGTTAAAATTGTTAAGAAGACTTGATCTGTGTGGTTGCTCGAAATTGAAAAAAATCCCTGATATCAAGGACACAGTGGAAAATTTAGTGGAACTAAACTTGCGCAATTGCTCAAGACTTGAGATGATTCCCTCTTCAATTGGAAGACTCACCAAGTTAGACATTATCCACTGCCAATCACTTAAAACTTTTCCAAGCAGCATTTTCAAATCGTTCACAGAACTTGATTTATCTGGTTTCTCAAAGCTAAATACTTTCCCAGAGATCTTGGAGCCTTCAGAAAGTTGTGCTTACATTAACTTAACAGAAACAGCAATTAAAGAACTGCCTTCATCATTGGACTGTTTGGTGGGACTTCAAAAATTGTATCTGGACCGGTGCCGTGATCTTGAATCACTTCCAAATAGCATAGGTCGCTTGTCATCATTAAGGAAATTGTCACTGCAAGATACTGGAATCGTGAACCTTCCGGATAGTATTGCTCATCTTTCAACCTTGGAATCACTTGATGTGAGTCATTGCAGAAAGCTTAAATGTATCCCACAACTTCCACCATTTCTTAAGGAGTTATTTGCACTTGATTGCCCATCCATTAGAAGAGTGATGCCAAATTCAAGGTTTAAACACCGGTATGATTCTAAAGAAGGTACCTTCGAATTTCATTTCACCAATAATGAAGAAAAGGATCATCAAAGTGCTCACAGTGATGCTCTGGCCGATGCAAGACTTAGGATCAGTGAGGATGCATATAGGTTTGTGTTCTACTGCTTTCCAGGGCGGGCAGTTCCTGATTGGTTCCCTTATCGTTGCCAGGGAAATTCAGTAACTGTGGATAAAGATTCTCTAAATTGGCACAATGATAATAGGCTCATTGGTTTTGCTATGTGTGTCGTTTTGCGACTTGAAAATATGAATCATTTACAATATAGATTTGATGATTTTAGATGCAGATCAACATTTGAATATGATGGCTGCACACACATCCTTCCCAATGATGACCAGCTAAATGACTCTTTCTATAGGAGTGGTCAACGGATGGGACATGTGATGCAAGACCACACATTCCTATGGAAATATAAGTTAATGGACTCTACAAGAATAGACAAAGGCAACTTTCATGCCCTCAGCTTCAGTTTTGGGATAGGCCATTTTGGCGGGTTCGGCCATCCGTGGGTAGATTTTGAACCATGGTTCCTGGTGAAAGAGTGCGGAATACGCCCTCTTTATGCCAAAGAGAAAGATGATATTGGTGGCCTTGTTGACTCTATCAGCGTTTCGAGAGTTTCAAATAATGACTTTGCAGAATGTAGTGGTGGGAGGAGGCATTGTCTGAGGCATTGTTTGATCTGGAAAATACCTATTGGAGCTCAAAAACAAATTGATATTTGTGGGAACCGCAAGGCTGTTGTTATCCATGTCCCTCATAGATTGAGGGAAGCTTTCAGGAAGTTTCATGTTAGGCTTGTTAGGGAGCTTGAGAAAAAGTTTAGTGGAAAGATTTTTCACCTTCTTTTCATGGGACTTGCCCTCTTTATGCCGAGTTTTTGGCTTTGGAGCATGAGTTGTTGTTGGCTTGGGACCTAG 6417 0.4044 MRLLPLFQSLPKTTHYSLRFASTALAHVDSPSFSDTPPRVPELHKDTSNVLQTLHRLHNRPSLALSFFTQLKQQGVFPHTTSTYAAIIRILCYWGLDRRLDSVFLDLIALSKQDPSFEIHDLFEELLEGDEGVDRKPHLLRAFDWYVKSCVSLNMFEEAYDFLFLTRRRGILPSIWTCNFLINRLVDHNEVERALAIYKQLKRLGLSPNNYTYAIVVKGLCRKGYLEEAEHMLKEMDEAGVNLDSHCCAALIEGICNHCSSDLGYEALQKFRMMNAPIEDHAYAAVIRGFCNEMKLDEAEIVVLDMESQGLVPDVRIYSALIYGYCKNRNLHKVSELCSQMTSKGIKTNCVVASYILQCLVEMGKTSEVVDMFKRLKESGMFLDGVAYNIVFDALCRLGKVDDAIEMLEEMRVKNIDLDVKHYTTLIKGYCLQNKLLDASDMFSEMIKKGFAPDIVTYNVLAAGLSRNGCACVAIDNLKAMEEQGVKPNSTTHKLIIEGLCSEGKVGEAETYVNILEDNGFKPDIVIYNVLVAGLSKNGHACGAIGKLDDMEKQGVKPNSTTHKLIIEGLCSEGKVVEAEAYFNRLEDKGVEIYSAMVNGYCEAYLVEKSYELFLELSDHGDIAKEDSCFKLLSNLCLAGHIDKAMKLLDKMLSFKVEPSKIMYSKVLAALCQAGDIKQACSLFDFLVRRGSTPDVQMYTIMINSLCRMNYLKEAHDLFQDMKRRGIKPDVIAYTVLLDGSFKNGATSDVLTIWGDMKQMETSPDVICYTVLIDGLIKTDDCVDAINLYEDMIHNGLEPDTVTYTAMISLFCKRGLVKEASELLDEMSSKGMTPNWKEKSYAVCRLITRMYLYLGIYFKIIWIWWTLPQLWFQFLHSGAAWRACPHFMFVKMYTSRKKIYKGKDADPTEFEELVEQGLFDLEDTYQELVSDLEKKFSGKDVILIATRRILRPPMKGFIVQRPCTQTLRAVYEAMLEDIVLSAEIVGKRVRYRVDGSKIMKEKHQCVHRLQIRRQISPELYKEIQESTIYVIIFSENYASSSWCLNELVKICECKKIYHDQRHVIPIFYKVEPATVRHQKKGSYADAFVKHEKRFPEEVIQSWKDALAEAADLSGWDSNATRPESKLIDGIVEDILTKLDRSFSSDHTQGMVGIEEHISQIQPLLQLESVGDVRIIGIWGMGGIGKTTLAKALHKKLATQFSSTSLIENAQQEIERVGTSILRKTYLSELLDEVYTSRLLDEMLKRARVLVIHDDMKDSSQVQELIGGRENFGPSSRIIVTSRDLQVLKNADADEIYEVKEMNFQDSLQLFSINAFKPNYRVQVDARLVEKVLKYAKGVPLALKVLGNLLYGRAEQVWKSQLEKLEKLPGPQIFNVLRLSYDGLDDEQKDIFLDIACFCAIRRVLYVEVVEMLDGCGFSIDIGMDVLRDRGLLSISEDYIEMHDLIREMGVENNVSMILENAVGTDEVQCIFLDMCKIKKDQLQSEVFKSMPNLRMLYFHRNFFKGECLPNEILPALLESLPDGLKVLHWEDFPLRSLPLKFFPENLVKLYMHDSHLEQLWWGNKELPNLKIIDLSYSSSLIGISSLSKSLCIEEIILVGCVSLTSLPSDMCKLKLLRRLDLCGCSKLKKIPDIKDTVENLVELNLRNCSRLEMIPSSIGRLTKLDIIHCQSLKTFPSSIFKSFTELDLSGFSKLNTFPEILEPSESCAYINLTETAIKELPSSLDCLVGLQKLYLDRCRDLESLPNSIGRLSSLRKLSLQDTGIVNLPDSIAHLSTLESLDVSHCRKLKCIPQLPPFLKELFALDCPSIRRVMPNSRFKHRYDSKEGTFEFHFTNNEEKDHQSAHSDALADARLRISEDAYRFVFYCFPGRAVPDWFPYRCQGNSVTVDKDSLNWHNDNRLIGFAMCVVLRLENMNHLQYRFDDFRCRSTFEYDGCTHILPNDDQLNDSFYRSGQRMGHVMQDHTFLWKYKLMDSTRIDKGNFHALSFSFGIGHFGGFGHPWVDFEPWFLVKECGIRPLYAKEKDDIGGLVDSISVSRVSNNDFAECSGGRRHCLRHCLIWKIPIGAQKQIDICGNRKAVVIHVPHRLREAFRKFHVRLVRELEKKFSGKIFHLLFMGLALFMPSFWLWSMSCCWLGT* 2139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2830 2138 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 314 348 IPR002885 -
Lja1g2830 2138 SUPERFAMILY L domain-like 1468 1811 - -
Lja1g2830 2138 PRINTS Disease resistance protein signature 1242 1256 - -
Lja1g2830 2138 PRINTS Disease resistance protein signature 1335 1349 - -
Lja1g2830 2138 PRINTS Disease resistance protein signature 1174 1189 - -
Lja1g2830 2138 PRINTS Disease resistance protein signature 1564 1580 - -
Lja1g2830 2138 Gene3D Tetratricopeptide repeat domain 203 276 IPR011990 GO:0005515
Lja1g2830 2138 Gene3D Tetratricopeptide repeat domain 38 202 IPR011990 GO:0005515
Lja1g2830 2138 Gene3D Tetratricopeptide repeat domain 514 589 IPR011990 GO:0005515
Lja1g2830 2138 Pfam Ribosomal protein S7e 926 1000 IPR000554 GO:0003735|GO:0005840|GO:0006412
Lja1g2830 2138 Pfam Ribosomal protein S7e 2063 2112 IPR000554 GO:0003735|GO:0005840|GO:0006412
Lja1g2830 2138 ProSiteProfiles TIR domain profile. 966 1138 IPR000157 GO:0007165
Lja1g2830 2138 SUPERFAMILY Toll/Interleukin receptor TIR domain 1009 1115 IPR035897 -
Lja1g2830 2138 Pfam PPR repeat family 419 466 IPR002885 -
Lja1g2830 2138 Pfam PPR repeat family 523 572 IPR002885 -
Lja1g2830 2138 Pfam PPR repeat family 694 740 IPR002885 -
Lja1g2830 2138 Pfam PPR repeat family 173 222 IPR002885 -
Lja1g2830 2138 Pfam C-JID domain 1868 2023 IPR045344 -
Lja1g2830 2138 SUPERFAMILY "Winged helix" DNA-binding domain 1371 1451 IPR036390 -
Lja1g2830 2138 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 625 659 IPR002885 -
Lja1g2830 2138 Gene3D Tetratricopeptide repeat domain 412 513 IPR011990 GO:0005515
Lja1g2830 2138 Gene3D Tetratricopeptide repeat domain 617 745 IPR011990 GO:0005515
Lja1g2830 2138 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 743 836 - -
Lja1g2830 2138 Gene3D Ribonuclease Inhibitor 1636 1815 IPR032675 -
Lja1g2830 2138 Pfam PPR repeat 795 828 IPR002885 -
Lja1g2830 2138 Pfam PPR repeat 380 412 IPR002885 -
Lja1g2830 2138 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 695 729 IPR002885 -
Lja1g2830 2138 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 517 745 - -
Lja1g2830 2138 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 43 518 - -
Lja1g2830 2138 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 730 764 IPR002885 -
Lja1g2830 2138 Pfam TIR domain 1013 1152 IPR000157 GO:0007165
Lja1g2830 2138 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 419 453 IPR002885 -
Lja1g2830 2138 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 174 208 IPR002885 -
Lja1g2830 2138 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 209 243 IPR002885 -
Lja1g2830 2138 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 800 834 IPR002885 -
Lja1g2830 2138 Gene3D Tetratricopeptide repeat domain 746 854 IPR011990 GO:0005515
Lja1g2830 2138 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 454 488 IPR002885 -
Lja1g2830 2138 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1133 1394 IPR027417 -
Lja1g2830 2138 TIGRFAM PPR: pentatricopeptide repeat domain 767 801 IPR002885 -
Lja1g2830 2138 TIGRFAM PPR: pentatricopeptide repeat domain 211 244 IPR002885 -
Lja1g2830 2138 TIGRFAM PPR: pentatricopeptide repeat domain 562 592 IPR002885 -
Lja1g2830 2138 TIGRFAM PPR: pentatricopeptide repeat domain 386 419 IPR002885 -
Lja1g2830 2138 TIGRFAM PPR: pentatricopeptide repeat domain 177 209 IPR002885 -
Lja1g2830 2138 TIGRFAM PPR: pentatricopeptide repeat domain 317 349 IPR002885 -
Lja1g2830 2138 TIGRFAM PPR: pentatricopeptide repeat domain 632 660 IPR002885 -
Lja1g2830 2138 TIGRFAM PPR: pentatricopeptide repeat domain 423 455 IPR002885 -
Lja1g2830 2138 TIGRFAM PPR: pentatricopeptide repeat domain 662 696 IPR002885 -
Lja1g2830 2138 TIGRFAM PPR: pentatricopeptide repeat domain 802 836 IPR002885 -
Lja1g2830 2138 TIGRFAM PPR: pentatricopeptide repeat domain 282 315 IPR002885 -
Lja1g2830 2138 TIGRFAM PPR: pentatricopeptide repeat domain 698 731 IPR002885 -
Lja1g2830 2138 SMART till_3 974 1112 IPR000157 GO:0007165
Lja1g2830 2138 Pfam NB-ARC domain 1154 1366 IPR002182 GO:0043531
Lja1g2830 2138 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 489 523 IPR002885 -
Lja1g2830 2138 Gene3D - 1300 1384 IPR042197 -
Lja1g2830 2138 Gene3D Tetratricopeptide repeat domain 277 384 IPR011990 GO:0005515
Lja1g2830 2138 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 660 694 IPR002885 -
Lja1g2830 2138 Gene3D Ribonuclease Inhibitor 1450 1635 IPR032675 -
Lja1g2830 2138 Gene3D - 993 1140 IPR035897 -
Lja1g2830 2138 Pfam PPR repeat 663 691 IPR002885 -
Lja1g2830 2138 Pfam PPR repeat 632 655 IPR002885 -
Lja1g2830 2138 Pfam PPR repeat 593 621 IPR002885 -
Lja1g2830 2138 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 765 799 IPR002885 -
Lja1g2830 2138 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 279 313 IPR002885 -
Lja1g2830 2138 Gene3D - 1141 1296 IPR027417 -
Lja1g2830 2138 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 559 593 IPR002885 -
Lja1g2830 2138 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 743 836 - -
Lja1g2830 2138 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 517 745 - -
Lja1g2830 2138 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 43 518 - -
Lja1g2830 2138 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 384 418 IPR002885 -
Lja1g2830 2138 Pfam Pentacotripeptide-repeat region of PRORP 261 378 IPR033443 -
Lja1g2830 2138 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 524 558 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2830 Lja-Chr1 34071342 34085266 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2830 1638 1817 WRKY Transcription Factor Family AT4G12020 28.718 4.32e-06 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2830 - - lja:Lj1g3v2980340.1 1298.88