Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2813 ATGAATTCCAATTCCTCAGAGAAAGAGAACCATGTTGATAGCACTAACAGTGACACCCTCTCTGCCATGGTGCTTGGTATCAGTGTGGTTTTCCCTGCAGCCCTCAATGCAGCGATTGAGCTCAACCTGTTTGACATAATTTCCAAGGGAAGCTCCCCACAAAATGGTGGGTTCTTGTCAGCCTCTGAAATCGCTTCTGAGCTACCAACCCAACACCACCACCCTGATTTGCCAAACAGGCTCGAACGCGTGCTGCGATTGCTCGCGAGCCACTCTCTTCTCGCTGCTTCCACTCGCTCCGGTGAGGATGGTGCAGGTAGCGAGGTGAGAGTGTATGGGGTCTCACCTTCTGGTCAATATTTTGTCTCTGAAGGAAATCGTGATGGTTACCTTGCTTCATTCACATCGTTTCTTTGTCACCGTGAACTGTTTAGGGTATGGCAAAATTTTAAGGAAGCAATTATTGACCCCGAGATTGATCTATTCAAGAGAGTTCATGGAACATCAAAGTTCGACCACTTCGGAAAAGATCCAGAAATGAACAATGTATTTAACAGAGCTATGTCTGATATATGCTCATCACACATGAACAGAATAATTGAAATATACACAGGATTTGAGGGTATATCAACTTTGGTTGACGTAGCAGGTGGAAATGGACAAGGTCTCAAAATGATAATATCCAAATACCCTTCAATTAAAGGGGTTAATTTTGACCTTCCACAAGTGATTGAAAATTCACCAATACGTCCCGGGATTGAGCATGTTGGAGGAAACATGTTTGAAAGTATTCCCAGAGGTGATGCCATAATGCTAAAGGCTATATTGCATAATTGGTCAGACGAGAAATGCTTGGAAATTTTAAGCAATTGTCACAAAGCTTTGCCAACAAATGGAAAGGTTATTGTAGGGGAATTCATACTGCCAGAAGATCCAGAAACTACAAATGAACATAAATATGTTTCAATTCTTGATAACATCATGTTTATTACACCTGGTGGTAGGGAAAGGACTGAGAAACAACTTGAGTGTTTGGGCAAGCGCTCTGGATTTTCCAGGTTTCAAGTTGTTTGTCGCGCTTTCTCTGTTTTGGGAGTGATCGAGTTTCACAAATAG 1116 0.4247 MNSNSSEKENHVDSTNSDTLSAMVLGISVVFPAALNAAIELNLFDIISKGSSPQNGGFLSASEIASELPTQHHHPDLPNRLERVLRLLASHSLLAASTRSGEDGAGSEVRVYGVSPSGQYFVSEGNRDGYLASFTSFLCHRELFRVWQNFKEAIIDPEIDLFKRVHGTSKFDHFGKDPEMNNVFNRAMSDICSSHMNRIIEIYTGFEGISTLVDVAGGNGQGLKMIISKYPSIKGVNFDLPQVIENSPIRPGIEHVGGNMFESIPRGDAIMLKAILHNWSDEKCLEILSNCHKALPTNGKVIVGEFILPEDPETTNEHKYVSILDNIMFITPGGRERTEKQLECLGKRSGFSRFQVVCRAFSVLGVIEFHK* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2813 371 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 371 - -
Lja1g2813 371 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 130 369 IPR029063 -
Lja1g2813 371 Gene3D - 1 121 IPR036388 -
Lja1g2813 371 Pfam O-methyltransferase domain 147 352 IPR001077 GO:0008171
Lja1g2813 371 PIRSF O-mtase 1 371 IPR016461 GO:0008168
Lja1g2813 371 PANTHER O-METHYLTRANSFERASE 1 371 IPR016461 GO:0008168
Lja1g2813 371 Gene3D Vaccinia Virus protein VP39 125 371 IPR029063 -
Lja1g2813 371 SUPERFAMILY "Winged helix" DNA-binding domain 17 125 IPR036390 -
Lja1g2813 371 Pfam Dimerisation domain 34 89 IPR012967 GO:0046983
Lja1g2813 371 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 23 371 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2813 Lja-Chr1 33827152 33829751 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2813 1 371 Monolignol Biosynthesis Gene Families AT5G54160 46.524 1.04e-107 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2813 - - gmx:100798295 533.872