Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2811 ATGAATTCCAATTCCTCAGAGAAAGAGAACCATGTTGATAGCACTAACAGTGACACCCTCTCTGCCATGGTGCTTGGTATCAGTGTGGTTTTCCCTGCAGCCCTCAATGCAGCGATTGAGCTCAACCTGTTTGACATAATTTCCAAGGGAAGCTCCCCACAAAATGGTGGGTTCTTGTCAGCCTCTGAAATCGCTTCTGAGCTACCAACCCAACACCACCACCCTGATTTGCCAAACAGGCTCGAACGCGTGCTGCGATTGCTCGCGAGCCACTCTCTTCTCGCTGCTTCCACTCGCTCCGGTGAGGATGGTGCAGGTAGCGAGGTGAGAGTGTATGGGGTCTCACCTTCTGGTCAATATTTTGTCTCTGAAGGAAATCGTGATGGTTACCTTGCTTCATTCACATCGTTTCTTTGTCACCGTGAACTGTTTAGGGTATGGCAAAATTTTAAGGAAGCAATTATTGACCCCGAGATTGATCTATTCAAGAGAGTTCATGGAACATCAAAGTTCGACCACTTCGGAAAAGATCCAGAAATGAACAATGTATTTAACAGAGCTATGTCTGATATATGCTCATCACACATGAACAGAATAATTGAAATATACACAGGATTTGAGGGTATATCAACTTTGGTTGACGTAGCAGGTGGAAATGGACAAGGTCTCAAAATGATAATATCCAAATACCCTTCAATTAAAGGGGTTAATTTTGACCTTCCACAAGTGATTGAAAATTCACCAATACGTCCCGGTATTCCATCAATCTCTTGCGACAACTGA 783 0.4406 MNSNSSEKENHVDSTNSDTLSAMVLGISVVFPAALNAAIELNLFDIISKGSSPQNGGFLSASEIASELPTQHHHPDLPNRLERVLRLLASHSLLAASTRSGEDGAGSEVRVYGVSPSGQYFVSEGNRDGYLASFTSFLCHRELFRVWQNFKEAIIDPEIDLFKRVHGTSKFDHFGKDPEMNNVFNRAMSDICSSHMNRIIEIYTGFEGISTLVDVAGGNGQGLKMIISKYPSIKGVNFDLPQVIENSPIRPGIPSISCDN* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2811 260 Gene3D Vaccinia Virus protein VP39 125 259 IPR029063 -
Lja1g2811 260 Pfam O-methyltransferase domain 147 249 IPR001077 GO:0008171
Lja1g2811 260 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 23 260 IPR016461 GO:0008168
Lja1g2811 260 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 256 - -
Lja1g2811 260 SUPERFAMILY "Winged helix" DNA-binding domain 17 125 IPR036390 -
Lja1g2811 260 Gene3D - 1 121 IPR036388 -
Lja1g2811 260 PANTHER O-METHYLTRANSFERASE 1 256 IPR016461 GO:0008168
Lja1g2811 260 Pfam Dimerisation domain 34 89 IPR012967 GO:0046983
Lja1g2811 260 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 130 254 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2811 Lja-Chr1 33791210 33793854 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2811 1 259 Monolignol Biosynthesis Gene Families AT5G54160 42.529 1.00e-59 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2811 K13066 - lja:Lj1g3v2994540.1 509.605