Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2805 ATGTATTACTTCAGTGGCTTATCTGGTTACATAAGTATTGGATGGCTGCTGCCTGGAAATGGAAGAAACAAGCTCAACGAACTAGAAACTGTTGCTTTGTTTCTTGCACGCACATTCTCACCTGAATCCAAAAAGAGTGGCTCAGTGTTCATTCCGTTCCCTTTTCATCGCTTGCTGTTGAAGCTAGCGCCATTTTCTCTGAAACTGTTGTATAAAAGCAAAGAATTGTTTCCTGAATCTTGTTCTGCATATATCTTTTCCCATCTGATGGCTGAGGAAAGTGTTGATGTACCAGTGATCCCAGGAGCAACTATGTCACATGGAGTTGAACTAAGAAGGCACTCTTCTGGAAGAGCAAGTTCTGGGAATGATAAAGAAAAAGTTGTTCCACAATATCTCAGAGCCTCTACTGGCTCTTGTCATGATTTTTGCAAATATGGGGCAAGGAAGCATGTGGTTGAAGCTAAGGAGGAGAGGCTTTCAATACCTAAGAGAGCTGAAAGAAAACCACGTCATCATAGTTTAGAAAACATTAATGGTGGGATCATGACATCATTTACCAAGCTTAGAGCTTCCGCTGATTCTGAGCCGACAAAGATACCGAGGCGCAGACAATCAGTTGATTCTGTGCTCCACATTTCTGTTGAAAAATCATCTGAGATAGGAAATGAAGCTGTGGTGAACAAAAACATAACACCACTTGTCAAGGTCAAATCATCTCTGCTTCAAAACTCCCATGTTTCTTCTATCCACAGGAGGCAAGAAATTTCATCAAGTTTTAAGGTGGAAACTCCATTAATGCTAACTTCAAAGAGGGTGGAACCTACATTGAAATCAACTTCTGAGAGGGTGAAAACTCATCAAAAAGCAGCTTCCCAGATGGTCAAAGCTTCATCCAAACACATTTCCAAGACCGCAAAAACGTCATCAGAGTTTGCTGAGAAGTATGTGATTTCCTTGAATCCAGATTCCATTGCAACAAAGAAGGTATCCTCTAAGAATTCCTCAGGAAACTCAGGTGGCCAAAGGAACAGTGAGATTAAAAAGGAAAAGAAGAAAGTCTCCTGCAAAGTTACTTCACCTTTAAGAGCTTCATTTCCATCCAAACCTCTCAAAAGCATTGCAAGTATTAATGCAAAAATGCGCAGGAGCCTGAAAATTGTGTCTAGTCTTAAGAATCAACCCAGGCCTAGAAAAGTTGAAGCTGAGGAACACAACAATGAGGCTCAGGAAAAGACTTTGTATGTCATCAAGGTAGAAAGTGAAAAACAAGCTTTGCAGTCTGATCAAAATACAAGCCAGGATATTGAATTGTCCCTCCCTCTTTCTTTGTCATCACATAAGTTGTCATCTTCCTCAATTTCTAAGCTCTCACCCCAAGAAGACCAGGAGGAATCTGAATCTGAATCTCAAACCAGTGAATATGTAGAGGCATTAGAAGTTGAAGAGAATGGAAAGCCTCAAAAGGATGGGATTGTACCAGGCTTTGAGGGGAAATTGGTTGAAACTATGACTGAGAAGAGTAGTCTTATGAGGCTTAAGTTCAGGAGAGGAATAGTGTTGGTGGGAAATGCTACTGATATTCATGCTGATGCTGACAACATTGATGGTGTAAGTGTAACTGAGAAGGTTGTTTTGAGACATCAAGATATGCAGGACAAAAAAGATGGGTTGGTTTTGTTCAACAATGTGATTGAGGAAACAGCAAGTAAACTTGTTGAAACTCAGAAGAGCAAGGTGAAGGCATTGGTTGGAGCCTTTGAAACTGTGATCTCTCTCCAAGAGAAAAAGCCTGTTGCTAACAGTGTCAATTGA 1815 0.4066 MYYFSGLSGYISIGWLLPGNGRNKLNELETVALFLARTFSPESKKSGSVFIPFPFHRLLLKLAPFSLKLLYKSKELFPESCSAYIFSHLMAEESVDVPVIPGATMSHGVELRRHSSGRASSGNDKEKVVPQYLRASTGSCHDFCKYGARKHVVEAKEERLSIPKRAERKPRHHSLENINGGIMTSFTKLRASADSEPTKIPRRRQSVDSVLHISVEKSSEIGNEAVVNKNITPLVKVKSSLLQNSHVSSIHRRQEISSSFKVETPLMLTSKRVEPTLKSTSERVKTHQKAASQMVKASSKHISKTAKTSSEFAEKYVISLNPDSIATKKVSSKNSSGNSGGQRNSEIKKEKKKVSCKVTSPLRASFPSKPLKSIASINAKMRRSLKIVSSLKNQPRPRKVEAEEHNNEAQEKTLYVIKVESEKQALQSDQNTSQDIELSLPLSLSSHKLSSSSISKLSPQEDQEESESESQTSEYVEALEVEENGKPQKDGIVPGFEGKLVETMTEKSSLMRLKFRRGIVLVGNATDIHADADNIDGVSVTEKVVLRHQDMQDKKDGLVLFNNVIEETASKLVETQKSKVKALVGAFETVISLQEKKPVANSVN* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2805 604 Pfam Plant calmodulin-binding domain 500 592 IPR012417 GO:0005516
Lja1g2805 604 MobiDBLite consensus disorder prediction 450 493 - -
Lja1g2805 604 PANTHER PLANT CALMODULIN-BINDING-LIKE PROTEIN 480 604 - -
Lja1g2805 604 PANTHER PLANT CALMODULIN-BINDING-LIKE PROTEIN 90 493 - -
Lja1g2805 604 MobiDBLite consensus disorder prediction 328 355 - -
Lja1g2805 604 PANTHER EMB|CAB62594.1 480 604 - -
Lja1g2805 604 PANTHER EMB|CAB62594.1 90 493 - -
Lja1g2805 604 MobiDBLite consensus disorder prediction 388 407 - -
Lja1g2805 604 MobiDBLite consensus disorder prediction 328 343 - -
Lja1g2805 604 SMART CaM_binding_2 489 592 IPR012417 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2805 Lja-Chr1 33688278 33694434 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2805 - - aprc:113862542 436.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2805 1 33688278 33694434 Lja1g2805 1 33688278 33694434 ECH
Lja1g2805 1 33688278 33694434 Lja2g1569 2 15348591 15352046 ECH
Lja2g1569 2 15348591 15352046 Lja1g2805 1 33688278 33694434 PCT