Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2785 ATGCCTCACAGAGCTACTTACATTTTCCCAAGGCAGTTTCCGGAGCGAGGGTTGAATGAATCTCAAAAGAAGATATTAGATCACGAGAAGCAAAAAGTCGTTGGCACCGTCAAATCACCAGATACGACTTTTGGGGTTGAAAACGACGTCGCCAACACCGTCCGAGGCAAGCATAAACAGGTTGAGGCCTTCTGCGAGTCTCTTCTCCGGGACAACAAAAGTAGTAACCGCCACCACCACCACCACCGGCCGGGACACCGCCTCAAGCTCCACCGTAACCGCCATGATGTTGACGACGGTGAAGCTCTTCTCCCGCCGCCGGTTCCGGTTAAGGATTCCGTTGACCGGCAGGTCTCGCTGCCGCGGCTTTCCAGCGGGAGTAGCTTGTTCACTCTGGATGATGGCACCGCCACCTTTTCCAGCGATGTCACCAAGGATGATACCACGTCGTCGTTTCGAGTCATCTCCGCCGCCACCGCCGCCGCGGAAGAAGCGAGAAATCAGGAACAACAGAAAGAAGAAAAAAAACGCGAGAATGAAGGTTACGCGCTGAAGAACAAAGAGAGCTACAATCTGCAAATGGCGTTTGCGAAGAGGCTCACATTCTTAGCCACCCTCGCCTCCGAGCCGGTGCTCACTCTCGACGCCGGGCTCGAAACGTGTGACGTTGAATCGGTTTCGCGTCGTTTGTGGGTGACGGGGTGCTTGTCCTACACTGACAAGATTTCTGACGGTTTCTACAACATTTTGGGACTGAATCCTTACTTGTGGTTGATGTGCAATGATGTGGAGGAAGAAGGGAAGTGCCTACCAACTTTGATGGCGCTTAAGGCGGTTGAACCGAGTGAGAGTTCGATTGAGGTGGTTCTTATTGATAGACGTGAGGATTCTCGGCTTCAGGAGATTCATGATAAAGCTGAACAGTTGTACTCAGCTTCTGAGAATGCATTGGTGCTGGTGGAGCAGCTGGGAAAACTTGTTGCTATTTGTCTGGGGGGTTCATTTCCGGTGGAGCAAGGAGATCTGCAAAAGCAGTGGAAGTTGGTTAGTCAGAGGTTGAAGAACTTTCACCACTGTGTTGTGCTTCCAATTGGTAATGTATCTGCGGGAATATGTAGGCATCGCGCGATTCTCTTCAAGGATGCAGAGATTGGCGGATTATATAGGTTTGCCATGTCGCATTGCTCGAGGTTGCAGGTACTGCGCTACGGATCATAG 1218 0.514 MPHRATYIFPRQFPERGLNESQKKILDHEKQKVVGTVKSPDTTFGVENDVANTVRGKHKQVEAFCESLLRDNKSSNRHHHHHRPGHRLKLHRNRHDVDDGEALLPPPVPVKDSVDRQVSLPRLSSGSSLFTLDDGTATFSSDVTKDDTTSSFRVISAATAAAEEARNQEQQKEEKKRENEGYALKNKESYNLQMAFAKRLTFLATLASEPVLTLDAGLETCDVESVSRRLWVTGCLSYTDKISDGFYNILGLNPYLWLMCNDVEEEGKCLPTLMALKAVEPSESSIEVVLIDRREDSRLQEIHDKAEQLYSASENALVLVEQLGKLVAICLGGSFPVEQGDLQKQWKLVSQRLKNFHHCVVLPIGNVSAGICRHRAILFKDAEIGGLYRFAMSHCSRLQVLRYGS* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2785 405 PANTHER SERINE/THREONINE-PROTEIN KINASE CTR1-LIKE ISOFORM X1 110 381 - -
Lja1g2785 405 Pfam Ethylene-responsive protein kinase Le-CTR1 223 380 - -
Lja1g2785 405 MobiDBLite consensus disorder prediction 162 181 - -
Lja1g2785 405 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 110 381 - -
Lja1g2785 405 Coils Coil 155 185 - -
Lja1g2785 405 MobiDBLite consensus disorder prediction 166 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2785 Lja-Chr1 33388006 33390761 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2785 1 380 MAP Kinase Kinase Kinase AT4G24480 40.132 1.07e-90 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2785 - - gmx:100786546 457.603