Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2774 ATGGCTTTTGAGGAGTCTGAGCATGTGATTCCAGAGCTGGAAAGGGAGGAGAATTTGATTGCTGCAGCAAGGCATATTGTGAAGGCATTAGGTTCAAATAAGCACCTTACTAGTGATGCCAAGAAAGTTCTGGCAGATCTTGGCTCACAGTTGTCCTCCATGACCATGCACAGTGAGAAGGAGGAGAGGAAGCAAGGCCGAAAGAACGATGATATCGACGAGGATGACGAAGGGGAGGAAGAGGAAGAAGAGGAAGAGGGTGTTAGTGCTGCTGAACAAAGGCTTGGTGAGATTCAGGAGAAAATAATGAGATGGGAGGAAGATCAGGCCATGATTTGGGATTTGGGGCCTGAAGAAGCATCTGAATATCTGAATGCTGCTAATGAAGCGCGCAGGTTGATCGAGAAGCTGGAGAGTATGCAGTTGAGTAAAGAGGACCAAGAATACAAGTTAATGCAGAAGGCTTATAGTGTTCTTCAAACAGCTATGGCAAGGCTTGAAGAAGAGTTCAGGAACCTGCTTATCCTGAACAGGCAACCTTTTGAACCGGAATATGTCTCTTTTCGGTCCATTGAGGAAGATGCTGTTGATGGAAACTCTTTTGTCTCTATAGGTGATGAATCATTTGAGGAATCACTACGAAGAGACAGTGTCAGCAGAGCCTCTGAGGAGCATGTCATTGATTTAGTTCATCCAGCTGTGATCCCAGATCTCAGGTGCATTGCAAACCTGCTGTTTGCTTCTAACTATGTCCAGGAATGTTCCCATGCTTACACCATTGTCCGCGGCGACGCATTAGACGAGTGCCTCTTCATTCTTGAAATGGAAAGGCTCAGTATTGAGGATGTCTTGAAAATGGAGTGGGGTCCTTTGAATTCAAAGATAAAAAGATGGATTTGGGCTGTGAAAATATTTGTCAGGGTGTATCTTGCAAGTGAGAAGTGGCTTAGTGAACAGATTTTCGGGGAGGGTGAGCCTGTGAGTCAAGCTTGTTTTGTTAATGCATCCAAGCCTTCAATCTTGCAGCTTCTGAATTTCGGCGAAGCCATGTCTATTGGCCCTCACCAGCCTGAAAAATTGTTCCGTATCCTTGACATGTATGAAGTTCTAGCAGATCTTATGCCAGACATTGATGTTTTGTACTCAGATGAGGTTGGTTCCTCAGTGAAAATTGAATGTCATGAGGTTCTAAAGAGATTAGGTGATTGCGTGAAGGCAACATTCATTGAATTTGAAAATGCCATTGCATCGAATGCGTCAACAGCCCCTTTTGTAGGTGGTGGAATACATCCTTTGACAAGGTATGTTATGAATTATCTTAGGACTCTCACCGACTACAGTGAAACACTCAACCTGCTTCTGAAGGATCAAGAAGATGATGACGCGATTTCGCTATCACCTGATATGAGCCCGGGTACAGAGGAAGATAGCAGAAGCCAGGGATCTCCAGATAGAGCTTCCTCAATGACTCTCCACTTCATATCAGTTGCTTCAATCTTGGAATGCAACCTTGAGGACAAGTCCAAGTTATACAAAGAAATTCCCTTGCAGCACTTGTTCTTAATGAACAACTTGCATTACATGGCTGAAAAGGTTAAAGGGTCGGAGCTCAGGATCATATATGGAGATGGGTGGATTAGAAAGCACAACTGGAAGTTTCAGGAGCATGCAATGAAATATGAAAGGTCTACTTGGATTTCCATTCTCAACTTTCTCAAAGATGAGGGAATTCATGTTCCCGGTACGAGTTCAGTCTCGAAAAGCCTTCTTAAGGAGAAGTTAAGAAGCTTCTACCTTGGCTTTGAGGATGTGTACAGGATCCAAACAGCTTGGCTTATCCCTGATGTTCAGCTTCGCGAAGACTTGAGGATTTCTATATCTGTCAAAGTGATCCAAGCTTATAGGACATTTGTTGGAAGAAATAGTAGTCACATAAGTGACAAACACCTTAAGTACAGTGCTGATGATTTGGAAAACTATCTTTTGGATTTCTTTGAAGGGTCTCCAAAGTTGTTGCAAAATCCCCATAGGAGGTGA 2037 0.435 MAFEESEHVIPELEREENLIAAARHIVKALGSNKHLTSDAKKVLADLGSQLSSMTMHSEKEERKQGRKNDDIDEDDEGEEEEEEEEGVSAAEQRLGEIQEKIMRWEEDQAMIWDLGPEEASEYLNAANEARRLIEKLESMQLSKEDQEYKLMQKAYSVLQTAMARLEEEFRNLLILNRQPFEPEYVSFRSIEEDAVDGNSFVSIGDESFEESLRRDSVSRASEEHVIDLVHPAVIPDLRCIANLLFASNYVQECSHAYTIVRGDALDECLFILEMERLSIEDVLKMEWGPLNSKIKRWIWAVKIFVRVYLASEKWLSEQIFGEGEPVSQACFVNASKPSILQLLNFGEAMSIGPHQPEKLFRILDMYEVLADLMPDIDVLYSDEVGSSVKIECHEVLKRLGDCVKATFIEFENAIASNASTAPFVGGGIHPLTRYVMNYLRTLTDYSETLNLLLKDQEDDDAISLSPDMSPGTEEDSRSQGSPDRASSMTLHFISVASILECNLEDKSKLYKEIPLQHLFLMNNLHYMAEKVKGSELRIIYGDGWIRKHNWKFQEHAMKYERSTWISILNFLKDEGIHVPGTSSVSKSLLKEKLRSFYLGFEDVYRIQTAWLIPDVQLREDLRISISVKVIQAYRTFVGRNSSHISDKHLKYSADDLENYLLDFFEGSPKLLQNPHRR* 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2774 678 MobiDBLite consensus disorder prediction 72 88 - -
Lja1g2774 678 MobiDBLite consensus disorder prediction 51 91 - -
Lja1g2774 678 MobiDBLite consensus disorder prediction 470 486 - -
Lja1g2774 678 Gene3D Exocyst complex component Exo70 102 673 - -
Lja1g2774 678 PANTHER EXOCYST COMPLEX PROTEIN EXO70 22 672 IPR004140 GO:0000145|GO:0006887
Lja1g2774 678 Pfam Exo70 exocyst complex subunit 296 662 IPR046364 GO:0000145|GO:0005546|GO:0006887
Lja1g2774 678 MobiDBLite consensus disorder prediction 56 71 - -
Lja1g2774 678 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 22 672 - -
Lja1g2774 678 MobiDBLite consensus disorder prediction 463 486 - -
Lja1g2774 678 Coils Coil 120 147 - -
Lja1g2774 678 Coils Coil 149 169 - -
Lja1g2774 678 Coils Coil 81 108 - -
Lja1g2774 678 SUPERFAMILY Cullin repeat-like 109 666 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2774 Lja-Chr1 33242270 33245217 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2774 12 678 EXO70 exocyst subunit family AT3G29400 48.018 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2774 K07195 - gmx:100799102 1117.83