Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2767 ATGGCTTCTCCAAGCAACTCCATCAAAATCCATGAGAACTGCCTCATAGCTCCTCCTCCTTCTTCAACCCACTTCTCTCTCCCTCTCACCTTCTTCGACATGTTCTGGCTCAGGTTCCACCCTGTTGAGCGCATCTTCTTCTACTCTCTTCCTCTCCCTCATTCACAGCCATCCTTTTTCTTTGACCAAGTGGTTCCAAAGCTCAAAACCTCACTCTCTTTCACCCTCCAACACTTTCTCCCATTAGCAGGGAGCATAGTTTGGCCTTCTGAATCAGATATACCCATCATTCAATTCAACCCTGGTGATGGAGTTTCCTTGGTCCTAGCAGAGTGTGATGATGATGAAGATGATGATGTTGCAGAATTCAATCAGATGTTAAAGCACAATTCACCTCGTGAAGCAACAGAGTCTCGCAAATTCGTACCCGACTTGGAATCTTCAGATTCTCGTGCCTCTGTTTTCTCCCTGCAGATTACTCTGTTTCGAAACAGGGGATTCTGCATAGGCATCAGCACCCACCATGCTGTTCTTGATGGAAAATCTTCAACCATGTTCATTAAGGCCTGGGCTTTAACATGTAAAACCCGTGAAGATACACCATCTTTGGCGCCTGAATTGGAACCTTTCTTCGACAGGGAAGTCATCAAAGATCCAAGTGGGCTTGGTAGCGTGTTCGTGAATAGCTGGAAAGAAATCTCATCCAAACTTGACCCTTCTGGTAACAGCAACGAGCGAAGCTTGAAGATCATGTCAAACTCAAACCCATCTCAAGAAATCGCTGAGGGCAAAGCTCGAGCCACGTTTGAGCTCACACGTGAAGACATAGAGAAGATAAAGAAAAGGGTGTTATCCATGTGGCACAAGGTGGAAGAAGGAGCACAGGAAAAAACACAACCAATAATCGATTCCTCAAAGCCAAATACTTTGTCAACATTTGTTGTTACCTGTGCTTATGTTTCTGTCTGCATTTCTAAAGCCATTCAAGAATCTGAAAGGGACAAAGATAAAGTACATAAATTTCTTTTTGGGTTCACCATGGATTGTAGGACACAGTTAAAGCCTCCAATCCCTGAGAACTATTTTGGAAATTGTGTGTCTTCTCATATAGTGGACAACACTGACTCTGAGGACTTCACAAAGGAAGATGGGGTTGTAATTGTTGCTAAGAGCATTCATAAGAAGATTAAAATGTTGCATCATAGGGGACCACTTGATGGAGTAGAGACATTGATGGTTAGGTTCATGTCTTTTGTAAGTGAGGGAGTTGTATCAATTGGAGTTGCAGGATCGAATCGATTTGGAGTTTATGGAACTGATTTTGGTTGGGGGAGGCCTAAGAAGGTGGAGATAACTTCAATTGATAGAAACTTAACGATTGGCATGGCAGAGAGCAAGGATGGGAAGGGTGGTGTTGAAGTTGGGTTGGTTCTTGATAAGCATGTGATGGGTCTGTTTGGTACTTTTTTCCTAGCAGGGCTATGCTCTGACTGA 1494 0.4364 MASPSNSIKIHENCLIAPPPSSTHFSLPLTFFDMFWLRFHPVERIFFYSLPLPHSQPSFFFDQVVPKLKTSLSFTLQHFLPLAGSIVWPSESDIPIIQFNPGDGVSLVLAECDDDEDDDVAEFNQMLKHNSPREATESRKFVPDLESSDSRASVFSLQITLFRNRGFCIGISTHHAVLDGKSSTMFIKAWALTCKTREDTPSLAPELEPFFDREVIKDPSGLGSVFVNSWKEISSKLDPSGNSNERSLKIMSNSNPSQEIAEGKARATFELTREDIEKIKKRVLSMWHKVEEGAQEKTQPIIDSSKPNTLSTFVVTCAYVSVCISKAIQESERDKDKVHKFLFGFTMDCRTQLKPPIPENYFGNCVSSHIVDNTDSEDFTKEDGVVIVAKSIHKKIKMLHHRGPLDGVETLMVRFMSFVSEGVVSIGVAGSNRFGVYGTDFGWGRPKKVEITSIDRNLTIGMAESKDGKGGVEVGLVLDKHVMGLFGTFFLAGLCSD* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2767 497 Gene3D - 262 495 IPR023213 -
Lja1g2767 497 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 5 497 - -
Lja1g2767 497 PANTHER - 5 497 - -
Lja1g2767 497 SUPERFAMILY CoA-dependent acyltransferases 296 457 - -
Lja1g2767 497 Pfam Transferase family 8 486 - -
Lja1g2767 497 Gene3D - 7 242 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2767 Lja-Chr1 33107271 33108985 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2767 8 491 Monolignol Biosynthesis Gene Families AT5G48930 23.896 2.33e-18 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2767 - - gmx:100813762 631.328