Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2766 ATGGCTTCTATGAACAACAACAACAACAACAACAGCATCAGAATCCACGAGCACTGCAAAGTTGCTCCTCCATCATCTGCAACCGAGGCATGTCTCCCTCTCATTTTTTTCGACTTGCTTTGGCTTAGGTTCCACCCTGTAGAGCGCATCTTCTTCTACAATCTCCAAAATCCAGAATCAGACCCATCTTTTTTCTTCCACAAAGTGGTTCCAAAGCTGAAAAATTCACTCTCCCTAACCCTTCAACACTTCCCTGCTCTAGCAGGAAACGTTGTTTGGCCTTCAGAATCAGAGAAACCACTAGTCAAATTCACCCCTGAGTCCAACACTGATTTCAACCATATCTTAGAGTACAACTCACTCCATGAAGCTGCAGAGTCTCGTTCTTTAATACCCCACTTGGAATCAACCGATTCCTCTGCTTCTGTTATGTCCCTGCAAATCACTCTGTTCCCAAACAGAGGTTTTTCCATTGGAATCAGCACACACCATGCTGTTCTTGATGGAAAGTCTTCAACGTTGTTCCTCAAGGCTTGGGCTTATCTATGTCAAACCAGTGAAGAATCTGAATCTGAATCAGAATCTGAATCTCGCCCTTTGCTTCCAGAGTTAGAACCCTTCTTTGACAGGAAAATCATCAAAGACAAAGAGCCAGCAGAACTTGGCATCACAATCGCAAAAAACTGGACAGAGGTTTTAACCAAGATGTTCCCAGATGAGAAAAGCAACGAGAAAACCTTAAAGATTCTACCTTTTCCACCAAAAGTTGAGGATTCAGTTAGAGGAAGGTTCCTGCTCACACGTGGAGATTTGGAGAAGATAAAGAAAAGGGTGCTATACATGTGGGAAGAAGATTTCAACAGAGAAGAAGAATCAATGGATTCGGTTTCGAAGCCACAAACATTATCATCCTTTGTTCTCACTTGTTCCTATGTGCTTGTTTGCATGGCCAAAGCAATTCATGGGGTTGAAAAGGAAAGACAGAAATTTGCTTTTGGATTCACTGTGGATTGCAGGGCAAGGTTAGAGCCTCAAATCCCTGATAATTATATTGGGAACTGTGTGTGGGGCCAGATAGTGGACACAGAACCAATGGATTTTATCAAGGAAGAAGGGCTTTTCTTAGTTGCTAAGAGCATTCATGATAAGGTAAAAAAGATAGGTGAAGAGGGTGTTTTTGAAGTGGCTAAAGTTGGGTTTTCTAAATTTGCGGCTTTGGCTAGTGAACGGGTTGAGATGATTGGAGTGGCAGGGTCGAATCGATTTGGTGTTTATGGGATTGATTTTGGGTGGGGAAAGCCTTGTAAAGTGGAGATAACATCAGTAGATAGAGGTTTGACAATTGGATTGGCAGAGAGTGAGGATGGGAAAGGTGGTGTTGAAGTTGGGATTGTTCTGAATAAACATGTCATGGATCTCTTCATTGCTCTGTTTCATGGAGGACTTTGTGATGAGTGA 1458 0.4252 MASMNNNNNNNSIRIHEHCKVAPPSSATEACLPLIFFDLLWLRFHPVERIFFYNLQNPESDPSFFFHKVVPKLKNSLSLTLQHFPALAGNVVWPSESEKPLVKFTPESNTDFNHILEYNSLHEAAESRSLIPHLESTDSSASVMSLQITLFPNRGFSIGISTHHAVLDGKSSTLFLKAWAYLCQTSEESESESESESRPLLPELEPFFDRKIIKDKEPAELGITIAKNWTEVLTKMFPDEKSNEKTLKILPFPPKVEDSVRGRFLLTRGDLEKIKKRVLYMWEEDFNREEESMDSVSKPQTLSSFVLTCSYVLVCMAKAIHGVEKERQKFAFGFTVDCRARLEPQIPDNYIGNCVWGQIVDTEPMDFIKEEGLFLVAKSIHDKVKKIGEEGVFEVAKVGFSKFAALASERVEMIGVAGSNRFGVYGIDFGWGKPCKVEITSVDRGLTIGLAESEDGKGGVEVGIVLNKHVMDLFIALFHGGLCDE* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2766 485 Gene3D - 8 237 IPR023213 -
Lja1g2766 485 Gene3D - 256 483 IPR023213 -
Lja1g2766 485 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 10 485 - -
Lja1g2766 485 PANTHER - 10 485 - -
Lja1g2766 485 Pfam Transferase family 14 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2766 Lja-Chr1 33088383 33089870 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2766 13 474 Monolignol Biosynthesis Gene Families AT5G48930 23.251 2.25e-16 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2766 - - gmx:100815354 621.313