Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2765 ATGAGTGCTATATCTTATTTTTGCCAAATACAATTCCTCACTTCCTCCACCAATTCGCAACACTTCCTTCTGTTTTCCACGGCTTCTATGAATAACAACAACAGCAGCATCAAAATCCACGAGCACTGCAAAGTTGCTCCTCAATCTGCAACCGAAACATGTCTCCCTCTCATGTTCTTCGACTTGCTTTGGCTCAGGTTCCACCCTGTAGAGCGCATCTTCTTCTACAATCTCCAAAATCCAGAATCAGACCCATCTTTTTTCTTCCTCAAAGTGGTTCCAAAGCTGAAAAATTCACTCTCCCTTGCCCTCCAACACTTCCCCCCTCTAGCAGGAAACGTTGTTTGGCCTTCAGAATCAAAGAAACCACTAGTTAAATTCACCCCTGGTGATGATGATGGTGTTTCGTTGATAATTGCAGAGTCCAACACTGATTTCAACCATATCTTAGAGTACAACACACTCCATGAAGCTGCAGAGTCTCGTTCTTTCATACCCCACTTGGAGTCAACCGATTCCTCTGCTTCTGTTATGTCCCTGCAAATCACTCTGTTCCCAAACAGAGGTTTTTCCATTGGAATCAGCACACACCATGCTGTTCTTGATGGAAAGTCTTCAACGTTGTTCCTCAAGGCTTGGGCTTATCTATGTCAAACCAGTGAAGAATCTGAATCTGAATCTCGCCCTTTGCTTCCAGAGTTAGAACCCTTCTTTGACAGGAAAATCATCAAAGACAAAGAGCCAGCAGAACTTGGCATCACAATCGCAAAAAACTGGACAGAGGTTTTAACCAAGATGTTCCCAGATGAGAAAAGCAACGAGAAAACCTTAAAGATTCTACCTTTTCCACCAAAAGTTGAGGATTCAGTTAGAGGAAGGTTCCTGCTCACACGTGGAGATTTGGAGAAGATAAAGAAAAGGGTGCTATACATGTGGGAAGAAGATTTCAACAGAGAAGAAGAATCAATGGATTCGGTTTCGAAGCCACAAACATTATCATCCTTTGTTCTCACTTGTTCCTATGTGCTTGTTTGCATGGCCAAAGCAATTCATGGGGTTGAAAAGGAAAGACAGAAATTTGCTTTTGGATTCACTGTGGATTGCAGGGCAAGGTTAGAGCCTCCAATCCCTGATAATTACATTGGGAACTGTGTGTGGAACCAGATAGTGGATACAGAGCCAATGGATTTTATCAAGGAAGAAGGGCTTTTCTTAGTTGCTAAGACCATTCATGATAAGGTAAAACAGTTAGGTGAAGAGGGTGTTTTTGAAGTGGCTAAAGTTGGGTTTTTTAAATTTGCGGCTTTGGCTAGTGAACGGGTTGAGATGATTGGAGTGGCAGGGTCGAATCGATTTGGTGTTTATGGGATTGATTTTGGGTGGGGAAAGCCTTGTAAAGTGGAGATAACATCAGTAGATAGAGGTTTGACAATTGGATTGGCAGAGAGTGAGGATGGAAAAGGTGGTGTTGAAGTTGGGCTTGTTCTGAATAATCATGTCATGGATCTCTTCATTGCTCTGTTTCATGGAGGACTTTGTGATGAGTGA 1548 0.4257 MSAISYFCQIQFLTSSTNSQHFLLFSTASMNNNNSSIKIHEHCKVAPQSATETCLPLMFFDLLWLRFHPVERIFFYNLQNPESDPSFFFLKVVPKLKNSLSLALQHFPPLAGNVVWPSESKKPLVKFTPGDDDGVSLIIAESNTDFNHILEYNTLHEAAESRSFIPHLESTDSSASVMSLQITLFPNRGFSIGISTHHAVLDGKSSTLFLKAWAYLCQTSEESESESRPLLPELEPFFDRKIIKDKEPAELGITIAKNWTEVLTKMFPDEKSNEKTLKILPFPPKVEDSVRGRFLLTRGDLEKIKKRVLYMWEEDFNREEESMDSVSKPQTLSSFVLTCSYVLVCMAKAIHGVEKERQKFAFGFTVDCRARLEPPIPDNYIGNCVWNQIVDTEPMDFIKEEGLFLVAKTIHDKVKQLGEEGVFEVAKVGFFKFAALASERVEMIGVAGSNRFGVYGIDFGWGKPCKVEITSVDRGLTIGLAESEDGKGGVEVGLVLNNHVMDLFIALFHGGLCDE* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2765 515 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 34 515 - -
Lja1g2765 515 SUPERFAMILY CoA-dependent acyltransferases 325 485 - -
Lja1g2765 515 Gene3D - 32 267 IPR023213 -
Lja1g2765 515 Gene3D - 286 513 IPR023213 -
Lja1g2765 515 PANTHER - 34 515 - -
Lja1g2765 515 Pfam Transferase family 46 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2765 Lja-Chr1 33079032 33080825 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2765 37 504 Monolignol Biosynthesis Gene Families AT5G48930 23.140 3.43e-18 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2765 - - gmx:100815354 636.721