Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2764 ATGAACAACAAAAACAGCATCAAAATCCACGAGAACTGCAAGGTTGCTCCTCCATCTGCAACCGAAGCATGTTTTCCTCTCATTTTCTTCGACTTGCTATGGTTCAGGTTGCACCCGGTAGAGCGCATCTTCTTCTACAATCTCCAAAATCCAGAATCAGACCCATATTTTTTCTTCCTCAAAGTGGTTCCAAAGCTGAAAACTTCACTCTCCCTTACCCTCCAACACTTCCCTGCTCTAGCAGGAAACATTGTTTGGCCTTCAGAATCAGAGAAACCACTAGTCAAATTCACCCCTGGTGATGATGGTGTTTCATTGATAGTTGCAGAGTCCAACACTGATTTCAACCATATCTTAGAGTACAACACACTCCATGAAGCTGCAGAAGGTTTTTCTATTGGAATCAGCACACACCATGCTGTTCTTGATGGAAAGTCTTCAACGTTGTTCCTCAAGGCTTGGGCTTATCTATGTCAAACCAGTGAAGAATCTGAATCTGAATCTCCCTCTTTGTTGCCAGATTTTGAACCCTTCTTTGACAGGAAAATCATCAAAGACAGAGAGCCAGCAGAACTCGGCATACCATTTGCAAAAAACTGGACAGAGGTTTTGTCCATGATGTTCCCAGTTGAGAAAAGCAACGAGCAAACCTTAAAGATTCTACCATTTCCACCAAAAGTTGAGGATTCAGTTAGAGGAAGGTTCTTGCTCACACGTGGAGATTTGGAGAAGATAAAGAAAAGGGTGTTATCCATGTGGGAAAAAGACTTCAACAGAGAAGGAGAATCAATCGATTCGGTTTCGGTCCCTCCTTCAAAGCCACAAACATTATCATCCTTTGTTCTCACTTGTTCCTATGTGCTTGTTTGCATGGCCGAAGCAATTCATGGGGTTGAAAAGGAAAGGCAGAAATTCGCTTTTTCATTCACTGTGGATTGCAGGGCAAGGTTAGAGCCTCCAATCCCTGATAATTACATTGGGAACTGTGTGTGGAGCCAGATAGTGGATACAGAGCCAATGAATTTTATCAAGGAAGAAGGGCTTTTCTTATTAGGTGAAGAAGGTGTTCTTGAAGTGGCTAAAGATGGGTTTTCTAAAGTTGTGGCTTTGGCTAGTGAACGGGCTGAGATGCTTACAGTGGCAGGGTCGAATCGATTTGGTGTTTATGGAATTGATTTTGGGTGGGGAAGGCCTGTGAAGGTGGAGATAACATCGGTAGATAGAGGTTTGATAATTGGATTAGCAGAGAGTGAGGATGGAAAAGGTGGTGTTGAAGTTGGGCTTGTTCTGAATAAACATGTCATGGATCTTTTCATTGCTCTGTTTCATGGAGGACTTTGTGATGAGTGA 1350 0.4281 MNNKNSIKIHENCKVAPPSATEACFPLIFFDLLWFRLHPVERIFFYNLQNPESDPYFFFLKVVPKLKTSLSLTLQHFPALAGNIVWPSESEKPLVKFTPGDDGVSLIVAESNTDFNHILEYNTLHEAAEGFSIGISTHHAVLDGKSSTLFLKAWAYLCQTSEESESESPSLLPDFEPFFDRKIIKDREPAELGIPFAKNWTEVLSMMFPVEKSNEQTLKILPFPPKVEDSVRGRFLLTRGDLEKIKKRVLSMWEKDFNREGESIDSVSVPPSKPQTLSSFVLTCSYVLVCMAEAIHGVEKERQKFAFSFTVDCRARLEPPIPDNYIGNCVWSQIVDTEPMNFIKEEGLFLLGEEGVLEVAKDGFSKVVALASERAEMLTVAGSNRFGVYGIDFGWGRPVKVEITSVDRGLIIGLAESEDGKGGVEVGLVLNKHVMDLFIALFHGGLCDE* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2764 449 Gene3D - 2 126 IPR023213 -
Lja1g2764 449 Gene3D - 227 447 IPR023213 -
Lja1g2764 449 PANTHER - 2 129 - -
Lja1g2764 449 Gene3D - 127 207 IPR023213 -
Lja1g2764 449 PANTHER - 128 449 - -
Lja1g2764 449 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 128 449 - -
Lja1g2764 449 Pfam Transferase family 130 438 - -
Lja1g2764 449 Pfam Transferase family 21 121 - -
Lja1g2764 449 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 2 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2764 Lja-Chr1 33065693 33067158 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2764 7 438 Monolignol Biosynthesis Gene Families AT5G48930 20.711 1.97e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2764 - - gmx:100815354 533.872