Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2761 ATGTCTGAAAAGGCTTTGAACTCCTTGAAGGATGAAAACCCAGATTTGCAGAAGCAAATTGGGTGCATTGCTGGATTTTTTCAGCTTTTTGACCGTCACCGTTTCCTCACAGGCCAAAGCACCAGCAGCTACAATCAGCACACATCTATTTCAGTTGAAAGCAATAATGACATCAAAGAGCTCAATAACAAAATTCAGAAAACAAAGGCAAAGAATCAGAAGAATGCAAGAGAGAAGCAGCAATTCTCCACAGAATCATCAGCTGCTTCTATGTCTTCATCATCTTGTTCCTCTAGCATGTCATCCATTGAGTTCAACAGAACAATTCAGACAGAATCACCACCAAAAAGTCAAATTAGAGTTGCAATAAACCCACCTTCAGAAATAACAATGAAGCAGCATGATACACCTAGCCAGAAATCCCTTGAGTTCTGTGACATTGTCAAAGACTCCATGTATAGAGAAGCACAAGGGTTGTCATTGAAAACTGCAACAAAAGAGAAAAAGAAAGGTCAGACTCATACATTGAAGCACATAGATTCTCCGCGGCCTTTGCAGCCTCACAAGTCTATCAATGGAGGAGTTACAGCGGCAAATGAACCATTCCATGTTCTTTCTAAGTCCAAGAAATCACCTTGGGACTTGCCGAGGCTCTCTTATGATGGGAGGGATACACAAGATAAATTCAAATCAGCCACAAAGCATAAGGAACTTCCAAGGCTTTCCTTGGATAGCAGACAAGGATCCACAAGAGGTTTCAATGAAGGAAACAAGGCTCACAACCTGTTGAAGGATCCACAAAAAGTGTATGGAATTGGAAGGAACTACAACACAGTGCTTAACAATCTGCAAGAACCAGAAACTTCTAAAAGATCATCTTGTGTTGTAGCGAAGTTGATGGGACTAGAAGCCCTCCCTCAAAAGACACAAACATGTGGATCTAGTGATGATACAATCACAAATGTGACACCATATTCGCGATTCGCGCTAGAACCAAGTCCTTGGAGGAAACCTGATTCAAGGCGAAGTTTACAATCACAAGATTCCAAAGGAAGTGAATCTGATATAAAAGCCTCAAAATCCTCATTATCTGTTTATGGGGAAATTGAGAAAAGGGTGTCAGAACTTGAGTTCAAAAGGTCTGGTAAGGATCTCAGAGCCCTTAAACAGATTCTTGATGCAATGCAGAGATATAAAGATACATCAGATATTGCAAGAGATCAAGCTTTAAACTCACCATCTAACAATCAGAACAATACCAGTATCAGTGAAAACTCCAATGTAAGAAGCCCAAGAATACCACAAAAGGACCCAGCATCTGTCACAGTTGAGAAATCAAATTCTAGTAAAATGCCAATTGTCATCATGAAACCAGCAAGAGTTACTAGAAAAGCCAACAACTCTTCTCCCCCTAGTACTCCCAGGAATGGAAGATTGGTTGATAAGCAAACAGCTAAAGGTATTAGTTCAACAACAAAAAATACCAAGGACAAGAACAATAACTTAAGAAATTCAAAATTGATGCAATCCTCCAAAGTTTCTCAGGACGGCAATGGAGAGAGCACCGCAAACTCAGGTAATATGACAGTGACTGGGAGCCCAAGACTACAAAAAAAGTTTGGTTTGGAAAGGCGTTCACCACCAGCAAGTCCATCATCAGATTCCAGCATTAACAGAAGAAAACATAATAGACAACCTGTGGAATTGTCTTCCCCAAGGCAAAATATCTCTACTTTGCCCGAAAGAAATGAACGTTTCGGTGATATCAGCTATCACTGGAAAGGTGTTATGCATCATGTCAATGTCATTTCTCCAGATTTTGACAGAAAAAGAAGCTTGGCAACTCATAGTGACATAGAAATCATACACATTGATCAATCAGGAAATATCAATAGCACATCCATCCAGCTGAGTGGCCTGAATCAAAGTAATGTATTTGAAGAGTTGAAGAAGGAATGCTCCAAGGCTGAGACATTAGTTAATCCAGAACAACCAAGTCCTGTATCTGTTCTTGATGCTGCATTTTATAGGGAAGACCCACCATCTCCAGTGAGAAAGAAATCAGACATCTCAAACAATTTAGGTGAAACTCTAAGCACTGATGATGATAGTGTGGAGAACTCAGTGGATCTTCATTCTTTAAGCAATGGATCTAGTGATAGAGACTTGAACACCCAGAATTTGGTTGAAATACTCAAAGAAATTGACTGGATTGATGAGAAATTTTTCAATTTCAGTAACACCAAGGATCCTGACCATAAGTACATATCAGAAATACTGTTAGCATCAGGTTTACTCAGTGGTCACAGATCTAGCCAGATACTTAATTCACGAGGTCAATTAATTAACCCAAAGTTATTCTTTGCACTTGAAGAAATAAAGAGAAGCAAGGGGGATTTCAGCATTGAAGGCAGTGCCAAGAAAATTTCCAGGATTATCAGTCCTGAGCAAATGCAAAGAAAACTCATATTTGATGTTGTTAATGACATTTTAGTTCAAAAACTGATATTGGAGAATTCTTCCACTTTGTGGTGCCTGCCAAATGAGCTAGAAGGAAGAAAGCTAAAAGGGCAAAAGCTTTTTTATGAGCTATGTACAGAAATTGATCAGTTACAACCTCAAAATAGGAATGTCAGGGTAGCTTCTGACGATGAGAATTTATCAAGTGTCTTGTGTGGAGATTTGAAGCATCATCACCCAATTTGGACTAACTGCTGCAGTGAGATACCAAATGTTGTGTTGGATATCGAACGGTTGATCTTTAAAGATTTGATCACTGAAGCTGTGAAGGGTGAAGTAGCAAACCTGTGTGGTAGACATTGCAGGCAATTGTTGTTTCCCAAGTAG 2847 0.3952 MSEKALNSLKDENPDLQKQIGCIAGFFQLFDRHRFLTGQSTSSYNQHTSISVESNNDIKELNNKIQKTKAKNQKNAREKQQFSTESSAASMSSSSCSSSMSSIEFNRTIQTESPPKSQIRVAINPPSEITMKQHDTPSQKSLEFCDIVKDSMYREAQGLSLKTATKEKKKGQTHTLKHIDSPRPLQPHKSINGGVTAANEPFHVLSKSKKSPWDLPRLSYDGRDTQDKFKSATKHKELPRLSLDSRQGSTRGFNEGNKAHNLLKDPQKVYGIGRNYNTVLNNLQEPETSKRSSCVVAKLMGLEALPQKTQTCGSSDDTITNVTPYSRFALEPSPWRKPDSRRSLQSQDSKGSESDIKASKSSLSVYGEIEKRVSELEFKRSGKDLRALKQILDAMQRYKDTSDIARDQALNSPSNNQNNTSISENSNVRSPRIPQKDPASVTVEKSNSSKMPIVIMKPARVTRKANNSSPPSTPRNGRLVDKQTAKGISSTTKNTKDKNNNLRNSKLMQSSKVSQDGNGESTANSGNMTVTGSPRLQKKFGLERRSPPASPSSDSSINRRKHNRQPVELSSPRQNISTLPERNERFGDISYHWKGVMHHVNVISPDFDRKRSLATHSDIEIIHIDQSGNINSTSIQLSGLNQSNVFEELKKECSKAETLVNPEQPSPVSVLDAAFYREDPPSPVRKKSDISNNLGETLSTDDDSVENSVDLHSLSNGSSDRDLNTQNLVEILKEIDWIDEKFFNFSNTKDPDHKYISEILLASGLLSGHRSSQILNSRGQLINPKLFFALEEIKRSKGDFSIEGSAKKISRIISPEQMQRKLIFDVVNDILVQKLILENSSTLWCLPNELEGRKLKGQKLFYELCTEIDQLQPQNRNVRVASDDENLSSVLCGDLKHHHPIWTNCCSEIPNVVLDIERLIFKDLITEAVKGEVANLCGRHCRQLLFPK* 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2761 948 PANTHER LONGIFOLIA PROTEIN 1 313 - -
Lja1g2761 948 MobiDBLite consensus disorder prediction 166 188 - -
Lja1g2761 948 PANTHER LONGIFOLIA PROTEIN 1 313 IPR033334 GO:0051513
Lja1g2761 948 MobiDBLite consensus disorder prediction 334 348 - -
Lja1g2761 948 MobiDBLite consensus disorder prediction 407 581 - -
Lja1g2761 948 Pfam Domain of unknown function (DUF4378) 752 927 IPR025486 -
Lja1g2761 948 MobiDBLite consensus disorder prediction 309 361 - -
Lja1g2761 948 PANTHER LONGIFOLIA PROTEIN 316 947 - -
Lja1g2761 948 MobiDBLite consensus disorder prediction 309 327 - -
Lja1g2761 948 Coils Coil 51 78 - -
Lja1g2761 948 PANTHER LONGIFOLIA PROTEIN 316 947 IPR033334 GO:0051513
Lja1g2761 948 MobiDBLite consensus disorder prediction 166 184 - -
Lja1g2761 948 MobiDBLite consensus disorder prediction 79 118 - -
Lja1g2761 948 MobiDBLite consensus disorder prediction 67 118 - -
Lja1g2761 948 MobiDBLite consensus disorder prediction 407 433 - -
Lja1g2761 948 MobiDBLite consensus disorder prediction 686 717 - -
Lja1g2761 948 MobiDBLite consensus disorder prediction 462 534 - -
Lja1g2761 948 MobiDBLite consensus disorder prediction 680 717 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2761 Lja-Chr1 32980136 32995916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2761 138 943 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 30.628 1.61e-74 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2761 - - gmx:102660880 1188.33