Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2756 ATGGTGATGAGTTTCAGGCTCAGGGATGACAAAGTTGCCGTGATGTTTTTGTTCGTCATTCAATTGGTGTTCCTTTTAGAGGTTAACTCATACCGCCCTGTTGATGATTATGCTATAAACTGTGGCTCCTCCGGAAACACTACCATCTATAACAGAACCTGGGTTGGAGACATTAATACCCAACTATTTTCCATCATTGGACCATCTTTGGAAGCAAATTCTCCTCCTCACTATCCTTCAACGTCCAATTATCCATTTTCCTCTGCTCGTCTCTCTCAGTCCAAATTCACATACTCTTTTCCAGTCTCAAATGGCCCCAAGTTCCTTCGCCTCCACTTTTATCCAACCACTTATCTTAACTTTGAACCAAACAACGCCCTCTTCTCTGTCACAGTTGGCAACTTTACCCTTCTCAAAGACTTCAAACCCTCACTTTGGGTTAACAAAGATGATGATGATGAAAACACAATCAGCAAAGAGTTCATCATCAACGTTGAAACAGGGGAGATGCTAAACGTGACTTTCACTCCAACCACCAACGAATCCACTAACTCTGCTTATGCTTTTATCAACGGACTCGAGGTCGTGTCCATGCCTTCCTTCCTCTACTACACCGATCCTAACCTCAACGAGTTAGATCCAGGTTACGATTTCAAGGTCGCTGGCCGTGGCGCCACTTATAAAATTGATAGCGAATCTCTGGAGACACTTTACAGAGTCAACGTTGGCGGCGGGGGGCAGGTTCCGCCAAATGACGATACCGGCATGTTCCGCAACTGGGAGGACGATTCTGTTTCCCATGGTCACTTAGAGAAGGAATATCCATACAGTGAATCAAGTGGCTTTGGCTATTCTCGATTAAACTACAAAAACAACTCTATTCCAGATTACACTGCACCAGCAATTGTGTACTTAACTGCCAGAAATTACGGGAGGCAAGCCACTGCAAATCACAACGTGACCTGGAATTTTGCAGTGGATTTGCAATTCAAGTACATGGTGAGGTTACATTTCTGCGAGTTTAACGAGAAGAATATCACCCATTACGGAGACAGAGCATTCCAGATTTTCATTGCGGAGACTCTTGCGGAGGAATATGCCGATGTCTATGGGTGGGGTGATGGTACTTTAGTGCCTGTTCATAGGGATTACGCTGTGTTGAATCTGCCATCAGAGGGAAAAGGAAGCACCTCTGTGAAAACTAATCTTTCCATCAAGCTCCAACGATTGCCAGATAAAAGACAGACCAACTTCGATGATGTCATATTGAATGGCATCGAGATTTTCAAAATTAGCGATGGAAACAACAATCTCGCCGGACCCAATCCTCAACCCATTCAATCTCCGCCACCGCCAAAGCAAGATAGTTCATCCAAAAAATCAAAGACCACGGTTGTTACAATTGTTGCGGCGGTTGCAGTTTCAGGTCTCATCCTAGCATCTGCTATGGGCATCGTAGTTTTCCGGCGAAGGAGAAGAAGATCTCATGATGCGGAGACCACAAAGCACGAAGGCTCGACTTCTCTGCCATCGCACCTCTGCCGCTACTTCACAATTGCAGAGATCAGAACTGCAACGAACGACTTCGACGACGTTTTTATCATCGGGGTCGGAGGGTTCGGAAACGTGTACAAAGGCTACATCGACGGAGGGTTCACACCGGTTGCGATCAAACGCCTCAAACCGGGTTCTCAACAAGGTGTGGACGAGTTCTTGAACGAGATTGAAATGCTCTCTCAGCTCCGTCACGTTCATTTGGTGTCCCTCATTGGTTACTGCAACGACGGTGCAGAGATGATTCTAGTCTATGACTTCATGCAACAGGGTACTCTCCGGGAGTGTCTGTACCATTCTAATAACAACAATAATCACCGCCCTCTCACGTGGAAGCAGAGGTTGGAGATTTTACTGGGTGCGGCGAGGGGGTTGCACTATCTCCATGCAGGTGTGAAGCACAATATCATTCACCGCGACGTGAAGAGCACGAACATCTTGTTGGATGAGAAATGGGTGGCTAAAGTTTCAGATTTCGGGTTGTCGAAAGTTGGCCCTACAGGGACGTCGATGACTCATGTCAGCACAGTAGTTAAAGGAAGCATCGGGTATTTGGACCCGGAGTACTACAAGCGTCAAAGATTGACGCTCAAGTCTGATGTGTACTCATTTGGTGTGGTGCTTCTTGAGGTGTTGTGTGCGAGGCCACCTTTGGTTCGGGCTCAAGAGAAGAAGAAGGTGAGTTTGGTGGATTGGTTTCGGAGATGTTATGAAAAAGGAGGGATTTATGAGATTGAAGAGATGGTGGATCCGTTTCTGCGGGATTCTATTGCGGATGAGTGTTTGAAACGTTACTGCCACATGACATTGAGTTGTTTGCATGATGATGGGAATCAACGGCCTGCAATGAGTGATGTAGTTGGGGCTTTGGAGTTTGCATTGCAATTGGTGGTGGTGAGTGAGGAAGATAAGATGAGGTTTGGTGGGACCCAAGAAGACGGGAAAAGTGAGCCAATGCCAAGGTTTATGGGTGATGATCATGGGAGTGATGGTTTGCTTTTCACTAGCAGTGGTGATTTTGGGTCGGGGACTAGCAAGGTGACCACAATCCCTGCCAGTACTGATGAGGAACATCCTTTGGTTTCAGCTATAGTGTTCTCCGAGATAGGAAATCCAACAGCACGGTAG 2682 0.465 MVMSFRLRDDKVAVMFLFVIQLVFLLEVNSYRPVDDYAINCGSSGNTTIYNRTWVGDINTQLFSIIGPSLEANSPPHYPSTSNYPFSSARLSQSKFTYSFPVSNGPKFLRLHFYPTTYLNFEPNNALFSVTVGNFTLLKDFKPSLWVNKDDDDENTISKEFIINVETGEMLNVTFTPTTNESTNSAYAFINGLEVVSMPSFLYYTDPNLNELDPGYDFKVAGRGATYKIDSESLETLYRVNVGGGGQVPPNDDTGMFRNWEDDSVSHGHLEKEYPYSESSGFGYSRLNYKNNSIPDYTAPAIVYLTARNYGRQATANHNVTWNFAVDLQFKYMVRLHFCEFNEKNITHYGDRAFQIFIAETLAEEYADVYGWGDGTLVPVHRDYAVLNLPSEGKGSTSVKTNLSIKLQRLPDKRQTNFDDVILNGIEIFKISDGNNNLAGPNPQPIQSPPPPKQDSSSKKSKTTVVTIVAAVAVSGLILASAMGIVVFRRRRRRSHDAETTKHEGSTSLPSHLCRYFTIAEIRTATNDFDDVFIIGVGGFGNVYKGYIDGGFTPVAIKRLKPGSQQGVDEFLNEIEMLSQLRHVHLVSLIGYCNDGAEMILVYDFMQQGTLRECLYHSNNNNNHRPLTWKQRLEILLGAARGLHYLHAGVKHNIIHRDVKSTNILLDEKWVAKVSDFGLSKVGPTGTSMTHVSTVVKGSIGYLDPEYYKRQRLTLKSDVYSFGVVLLEVLCARPPLVRAQEKKKVSLVDWFRRCYEKGGIYEIEEMVDPFLRDSIADECLKRYCHMTLSCLHDDGNQRPAMSDVVGALEFALQLVVVSEEDKMRFGGTQEDGKSEPMPRFMGDDHGSDGLLFTSSGDFGSGTSKVTTIPASTDEEHPLVSAIVFSEIGNPTAR* 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2756 893 MobiDBLite consensus disorder prediction 437 460 - -
Lja1g2756 893 Pfam Protein tyrosine and serine/threonine kinase 535 807 IPR001245 GO:0004672|GO:0006468
Lja1g2756 893 Gene3D Transferase(Phosphotransferase) domain 1 606 824 - -
Lja1g2756 893 PANTHER CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN 29 824 - -
Lja1g2756 893 ProSiteProfiles Protein kinase domain profile. 529 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g2756 893 Pfam Malectin-like domain 39 431 IPR024788 -
Lja1g2756 893 Gene3D Phosphorylase Kinase; domain 1 489 605 - -
Lja1g2756 893 ProSitePatterns Protein kinases ATP-binding region signature. 535 558 IPR017441 GO:0005524
Lja1g2756 893 SMART serkin_6 529 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g2756 893 Gene3D - 233 432 - -
Lja1g2756 893 Gene3D - 36 198 - -
Lja1g2756 893 CDD STKc_IRAK 535 809 - -
Lja1g2756 893 SUPERFAMILY Protein kinase-like (PK-like) 505 815 IPR011009 -
Lja1g2756 893 ProSitePatterns Serine/Threonine protein kinases active-site signature. 654 666 IPR008271 GO:0004672|GO:0006468
Lja1g2756 893 PANTHER OS07G0166700 PROTEIN 29 824 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2756 Lja-Chr1 32911443 32914553 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2756 20 893 Receptor kinase-like Gene Family AT3G51550 43.548 0.0 659
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lja1g2756 Malectin_like 4.2e-36 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2756 - - lja:Lj0g3v0259209.1 1042.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2756 1 32911443 32914553 Lja1g2756 1 32911443 32914553 ECH