Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2755 ATGTTTCTCAAGTGTTTCGGTTTGAAGAAGAAGAAACATACTCCGTGTGAGACTGAGAGACCGTACCCAACAGTCATAGAAGAGTTGTGCCATCACTTTTCTCTTGCTGATCTTAAGAAAGCAACCAATAACTTCGATGAAAATAATGTAATTGGAGACGGAGGTAATGGTAAAGTATACAAAGGTTTTCTTCAACTTGATCATGTTGCTACTACAGTAGTAGCGGTGAAGCAAATGGATAATTCTTCTTTTTGGGGACTGAAGGAGTTCAAGAATGAAATTGAGTTACTCTGCCAGCTTCGTCACCCTAATTTGATCACTCTTATCGGGTTCTGCCTTCACAAAGACGAGAAGATTATTGTTTTTGAGTACATGTCCAATGGTTCCCTCGCTGATCGCCTACTGAATAGTAGGGATGCAAGGAAACCGCTCTCATGGAAGAAGAGAATTGAGATCTGCATAGGAGCAGCACGTGGGTTGCACTACCTTCACTCGGGAGCCAAACGCAACATTTTTCACCGTGGCATCAAACCTGCTAACATTCTTTTGGATGAAAATATGGTGCCCAAACTCTCCGATTTCAAGCTTTCCTTACAGGGGTCATTGTTCACGGAAAAGTCAAAACCCATTGAAGACTCAGTTGTTGGTACACACGGTTATGTAGCCCCTGAGTATGTCGCGACTGGTATCATGACATATAAATGTGACGTTTATTCATTTGGTGTTGTTCTATTAGAAGTGGTATGTGCAAAGCGAATTATGACAATGGTGGATGAGATGGGAAAAATAGAAATGTCTAATATTGGTTCAGAATCTTCAGATGATGAAATTACTTTCCCTTCTTACATTATGTTAAAGCTCCGAGCTAAGGATATTGATCCAGCTCTAATAGGAATAATTGCACCAGAGTGTTTTACTGTCTACATAGATATCATAGACATGTGCTTGAAAGATGATCCAAATGAACGACCAACAATGGGTGAAGTGGAGGTGCAACTTGAGCACGCTCTCGCTTTGCAACACGAAGCAGACAACGCCAATGATACCAGCAGCATTATCCAACCTCAACAAGAAGATGTTCCAATTTCACATTGA 1095 0.41 MFLKCFGLKKKKHTPCETERPYPTVIEELCHHFSLADLKKATNNFDENNVIGDGGNGKVYKGFLQLDHVATTVVAVKQMDNSSFWGLKEFKNEIELLCQLRHPNLITLIGFCLHKDEKIIVFEYMSNGSLADRLLNSRDARKPLSWKKRIEICIGAARGLHYLHSGAKRNIFHRGIKPANILLDENMVPKLSDFKLSLQGSLFTEKSKPIEDSVVGTHGYVAPEYVATGIMTYKCDVYSFGVVLLEVVCAKRIMTMVDEMGKIEMSNIGSESSDDEITFPSYIMLKLRAKDIDPALIGIIAPECFTVYIDIIDMCLKDDPNERPTMGEVEVQLEHALALQHEADNANDTSSIIQPQQEDVPISH* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2755 364 ProSiteProfiles Protein kinase domain profile. 45 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g2755 364 SUPERFAMILY Protein kinase-like (PK-like) 22 336 IPR011009 -
Lja1g2755 364 PANTHER OS07G0166700 PROTEIN 17 350 IPR045272 GO:0004714|GO:0006468
Lja1g2755 364 MobiDBLite consensus disorder prediction 344 364 - -
Lja1g2755 364 PANTHER TYROSINE KINASE FAMILY PROTEIN 17 350 - -
Lja1g2755 364 ProSitePatterns Protein kinases ATP-binding region signature. 51 77 IPR017441 GO:0005524
Lja1g2755 364 Gene3D Phosphorylase Kinase; domain 1 8 124 - -
Lja1g2755 364 Gene3D Transferase(Phosphotransferase) domain 1 125 359 - -
Lja1g2755 364 Pfam Protein kinase domain 46 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2755 Lja-Chr1 32885102 32888341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2755 29 344 Receptor kinase-like Gene Family AT3G51550 43.038 2.16e-75 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lja1g2755 Pkinase 4.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2755 - - lja:Lj1g3v3051570.1 532.332