Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2751 ATGTTTCTCAAATGTTTGGGCTTCTCTAGTTCAAAGCATATCAATTCGGATTCACCATCATCTGATGCAGCCATGACCTTGCATGTGAGATTATCTAAGAGACCCTATCAAACAGTTATAGAAGAGCTATGCCATCAATTTTCTCTGGCTGATCTCAAGAAAGCAACCAACAACTTTGACAAAAACCAAGTAATCAGAAGTAAAGGCTTTAGTGTAGAATACAAAGGCTGTTTCCAACATGATGTTGGTGTTACAGGCACAGTAGCGGTAAAACGAATGCATCAGGGTACAGGCCAAGGATTGCGCGAGTTCATGAATGAAATTGAGTTGCTCTGCCAGCTTCGTCACCCGAATTTGATCACTCTTATAGGATTCTGCAACCACAGAGATGAGAAGATTCTTGTGTACGAGTACATGTCCAATGGTTCTCTCTATGATCACCTGCACAATATTCACATGGAACCACTCTCATGGAAGAAAAGGCTTGAGGTGTGCATAGGTGCAGCATGTGGGTTGCACTACCTTCACACAGGAACCAAACGAACCATACTTCATTGCCACATAGACTCCAATAGCATTCTGCTGGACAATAATATGGTGTCAAAGATCTCAAGTTTTGGACTTGCCTTACAAGGACCCCATTTTACATCCAAACCAAAACCAAAACCAATACCAGATGATGAGTTTACTTCATTCATAGGTACATACGGTTACACTGCACCTGAGGTTCTGCAAAACATGACCTTCACTGATAAAAGTGATGTGTGGTCCTTTGGAACAGTTCTACTTGAAGTGGTGTGCACAGATAACACGCTAATATGGACAGGATATCCTATTGAGCAGAGTATAGATCCAAAAATCAAAGGACACATTGCACCAGCATGTTGGGAAGTGTTTATGGATATCACAAAAAGATGCTTGAAGTGGGAACCTGATGAGAGACCAGCAATGGGTGAAGTAGAGCTACAACTTGAGGGTGCTTTGTCATTGCAAGAAGAAGCAGATAGCAAAAAGAATAATGGTGATTATTATCACTTATTAACCACCACCACTATTACTAATTCTCTACAAGAAGAGACATCAATTTCATGTGCAAGCAATGAATTTTAG 1110 0.4081 MFLKCLGFSSSKHINSDSPSSDAAMTLHVRLSKRPYQTVIEELCHQFSLADLKKATNNFDKNQVIRSKGFSVEYKGCFQHDVGVTGTVAVKRMHQGTGQGLREFMNEIELLCQLRHPNLITLIGFCNHRDEKILVYEYMSNGSLYDHLHNIHMEPLSWKKRLEVCIGAACGLHYLHTGTKRTILHCHIDSNSILLDNNMVSKISSFGLALQGPHFTSKPKPKPIPDDEFTSFIGTYGYTAPEVLQNMTFTDKSDVWSFGTVLLEVVCTDNTLIWTGYPIEQSIDPKIKGHIAPACWEVFMDITKRCLKWEPDERPAMGEVELQLEGALSLQEEADSKKNNGDYYHLLTTTTITNSLQEETSISCASNEF* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2751 369 ProSiteProfiles Protein kinase domain profile. 59 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g2751 369 PANTHER OS07G0166700 PROTEIN 29 346 IPR045272 GO:0004714|GO:0006468
Lja1g2751 369 PANTHER TYROSINE KINASE FAMILY PROTEIN 29 346 - -
Lja1g2751 369 Pfam Protein tyrosine and serine/threonine kinase 75 322 IPR001245 GO:0004672|GO:0006468
Lja1g2751 369 SUPERFAMILY Protein kinase-like (PK-like) 36 326 IPR011009 -
Lja1g2751 369 Gene3D Phosphorylase Kinase; domain 1 20 138 - -
Lja1g2751 369 Gene3D Transferase(Phosphotransferase) domain 1 139 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2751 Lja-Chr1 32834650 32837445 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2751 34 359 Receptor kinase-like Gene Family AT5G39000 39.884 4.73e-72 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lja1g2751 PK_Tyr_Ser-Thr 5.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2751 - - lja:Lj1g3v3039470.1 753.821