Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2750 ATGTTTCTCAAGCATTTGTGTTTTTGCCGTTCAAAGCGTGTAAGTTCATCCCAGAGGAACTATCCAACAGTAATAGAAGAGCTATGCCCTCGATTTTCTCTGACTGATATTAGGAAATCAACCAATAACTTTGATGAAAATCAAATACTTGGACATGGAAACCTTTGTACAGTTTACAAAGGCTGTCTACAACAAAAAGGAACTACCGATAACACGGTTGCAATCAAGCGAATTTACGCGCATACTGACCGAGAAGTCAGAGAGTTCAAGAATGAAATAGAGATGCTCTGCCAACTTCGTCACCCTAATTTGGTCACTATAATCGGATTTTGCGACAGCAAAGATGAGAATATTATTTTGTATGAGTACATGGCCAATGGAGCTCTCCATGATCACCTATACGGTATTAAAAAAGAACCACTCTCATGGAAGATGAGGCTAAAGATATGCATAGGAGCAGCATGTGGATTACACTTCCTTCACTCCGGAGTCAAGCGCACCATCTTTCACCGTGACATACAACCTTACAAGATTTTACTGGATAACAATATGGTGCCAAAACTCGCAGACTTAAGGTTTTCCTTGCAGGGACCTTTGTTTAAGTCAAAGCCAAAACCAAAGTCCATATTAAATGATAACTTCCTAGGTACACATGGTTATGTGGCCCCTGAGATTTTACAAAACAATGCAGTAACAGATAGGTGTGACGTTTACTCCTTTGGTGTTGTTCTGCTAGAAGTGGTATGCAGGAAAAAGCTAGAAATTGTTAAGAGACAGAGGCAACCTGTGGAGGAGAACATTGATTCGGATATCGAAGGAAAGATTGCAGAAGAGTGTTGGAAGGTTTATGTGGATGTTACAGAAAGATGCTTGAGGCATGATCCAAATGAGAGACCTTCAATGGGTGAAGTAGAGGTGCAACTTGAGCTTGCATTGTCACTGCAGGTAGAAGCAGATAGCAGATACACCAATGGAGATCCTTACACTCTATCATCTAAAACCATTATTGATCCTCCACCAGAAAGAGGCACCAGTTTTGGCCAAAAATAA 1050 0.4067 MFLKHLCFCRSKRVSSSQRNYPTVIEELCPRFSLTDIRKSTNNFDENQILGHGNLCTVYKGCLQQKGTTDNTVAIKRIYAHTDREVREFKNEIEMLCQLRHPNLVTIIGFCDSKDENIILYEYMANGALHDHLYGIKKEPLSWKMRLKICIGAACGLHFLHSGVKRTIFHRDIQPYKILLDNNMVPKLADLRFSLQGPLFKSKPKPKSILNDNFLGTHGYVAPEILQNNAVTDRCDVYSFGVVLLEVVCRKKLEIVKRQRQPVEENIDSDIEGKIAEECWKVYVDVTERCLRHDPNERPSMGEVEVQLELALSLQVEADSRYTNGDPYTLSSKTIIDPPPERGTSFGQK* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2750 349 Pfam Protein tyrosine and serine/threonine kinase 47 307 IPR001245 GO:0004672|GO:0006468
Lja1g2750 349 Gene3D Phosphorylase Kinase; domain 1 5 123 - -
Lja1g2750 349 ProSiteProfiles Protein kinase domain profile. 44 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g2750 349 SUPERFAMILY Protein kinase-like (PK-like) 18 312 IPR011009 -
Lja1g2750 349 PANTHER TYROSINE KINASE FAMILY PROTEIN 14 329 - -
Lja1g2750 349 PANTHER OS07G0166700 PROTEIN 14 329 IPR045272 GO:0004714|GO:0006468
Lja1g2750 349 Gene3D Transferase(Phosphotransferase) domain 1 124 326 - -
Lja1g2750 349 MobiDBLite consensus disorder prediction 323 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2750 Lja-Chr1 32830799 32833352 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2750 9 344 Receptor kinase-like Gene Family AT1G30570 37.892 2.71e-72 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lja1g2750 PK_Tyr_Ser-Thr 2.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2750 - - gmx:100779112 477.633