Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2748 ATGCTTCTCAGACATATGGGATCCTGTTTTTCAAGTCAAAACAGTTCCTCTAAAAAGCAGTACTCTCGAACAGTGATAGAAGAGTTATACCCTCAATTTTCTCTGGCTGATCTCAGAAAAGCAACCAACAACTTTGATGAGAACCGAATCATAGGAAGAGGAGCCTTCGGAGACGTGTACGAAGGTTTTCTAAAACATGATGCTGAAACTGATTATACAGTTGCATTGAAGCGCATGTATAGAAAATCACGGCAAGGGATCACTGAGTTCAAGAATGAGGTTTTGTTGTTGTGTCAGCTTCATCACCCTAATTTGGTCTCTCTTATAGGATTCTATGAGGACAAAAATGAGACAATTATTTTGTACGAGTACATGCCTAATGGATCTCTCCATAATCATCTATATGGCAAGCATATGGAACCATTGCCATGGAAGAAAAGGCTAGAAATATGCATAGGAGTAGCTCATGGACTGCACTACCTTCACACAGGAGCTAAGCGCACCATCTTTCACCAAAATCTCAACCTCAGTACTATTCTTTTGGATATAAATATGGTGCCAAAACTCACCGGATTCGGGCTTTCTATATTGGGACCACGTTTAGGTACATCTGGTTACAATGCCATAAACAATGCATTCACAGTTGATTATGATGTTTATTCCTTTGGTGTGATTCTACTATTAGTGGTATGCACAAAGGACAAGAAAACAATTTTTGACAAGTTTAACAGATTGGAGAGCCAAGATTCAGGGGAGAGCAAAAGAGCAGATTCAGAGAAGTTTATCAATGTCACGCCAGGTACCATGGATATATATGACTTGGTGCATAGGTTCCCTGTTGAGGAGATGATTGATCCAGTTCTCGTGGGAAATATTTCACAAGCGTGTTGGGAAGTATTTATAAACATTGCAGAAAGATGCTTGAAGCAGGAACCGACTGAGCGACCAACGATGGGTGAAGTAGAGGTGGAACTTGAGCATTCTCTAGCAAAGCAGGAGGAAGCAGATGCCAGCAAGACTAGTGATTATATCTTACATTCCTCAACCATTTTCAATGATGAGCTAGAGTAG 1071 0.4052 MLLRHMGSCFSSQNSSSKKQYSRTVIEELYPQFSLADLRKATNNFDENRIIGRGAFGDVYEGFLKHDAETDYTVALKRMYRKSRQGITEFKNEVLLLCQLHHPNLVSLIGFYEDKNETIILYEYMPNGSLHNHLYGKHMEPLPWKKRLEICIGVAHGLHYLHTGAKRTIFHQNLNLSTILLDINMVPKLTGFGLSILGPRLGTSGYNAINNAFTVDYDVYSFGVILLLVVCTKDKKTIFDKFNRLESQDSGESKRADSEKFINVTPGTMDIYDLVHRFPVEEMIDPVLVGNISQACWEVFINIAERCLKQEPTERPTMGEVEVELEHSLAKQEEADASKTSDYILHSSTIFNDELE* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2748 356 ProSiteProfiles Protein kinase domain profile. 45 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g2748 356 ProSitePatterns Protein kinases ATP-binding region signature. 51 77 IPR017441 GO:0005524
Lja1g2748 356 Gene3D Transferase(Phosphotransferase) domain 1 125 352 - -
Lja1g2748 356 PANTHER TYROSINE KINASE FAMILY PROTEIN 17 345 - -
Lja1g2748 356 SUPERFAMILY Protein kinase-like (PK-like) 23 327 IPR011009 -
Lja1g2748 356 Pfam Protein tyrosine and serine/threonine kinase 48 195 IPR001245 GO:0004672|GO:0006468
Lja1g2748 356 Gene3D Phosphorylase Kinase; domain 1 5 124 - -
Lja1g2748 356 PANTHER OS07G0166700 PROTEIN 17 345 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2748 Lja-Chr1 32825133 32826385 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2748 32 333 Receptor kinase-like Gene Family AT1G30570 40.439 3.82e-65 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lja1g2748 PK_Tyr_Ser-Thr 1.2e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2748 - - adu:107486597 335.88