Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2741 ATGTTTCTCAAGTCTCTGGGTTTTGACCGTTTGAGGAAGCATACTAAGAGACCCTACCCAACAGTAATAGAAGAGCTATGCCATCAATTTTCTCTGGCCGATCTTAGGAAAGCAACCAATAACTTTGATCAAAATAATGTAATTCGAGAAAGAATATGTCCTAAAGTTATAGTATATAGAGGTTGTCTTCAACTTGATCATGTTGCTACAGCAGTAGTGGTTAAGCGAATGTCTGTTAAGTTGGGAGTGGAAGAGATGAAGAGGGAAATTGAGTTGCTCTGCCAGCTCCGTCACCCTAATTTGATCTCTCTTATCGGATTCTGCATCCACAAAGATGACATTTGTACTGTTTTCAAGTACATGTCCAATGGTTTCCTAAGTGATCATCTATTCAAGCGGGATGATCATGATAGGGAACCACTCTCATGGAAGAAGAGGCTAGAGATCTGCATAGGAGTAGCGCGCGGGGTGCACTACCTTCACACGGGACTCAAACGCATCATCATTCACCGTGAAATCTACCCCAATAACATTCTTTTAGATGAAAACATGGTGCCCAAACTCTCAGATTTCAGGCATTCATTACAGGGGCCGTTGTTCACTACAGAGTCCAAACCAATTGAAGGAAGTGTATATCCCCTTGCAGGTATGCCGGGTTTCATGGCCCCCGAGCAATTCAATTTCAGGAACAGGCACTACACTGTTGTGACGACGGATAAATGCGATGTTTATTCATTTGGCATGGTTCTATGTGAAGTGGTATGTGCAGAGCCAATTTATACAATCATAAAGGAGAAGGAGAAGATTGATTACTATAACAAAAAAGCGCCTAGTATTAGCATACGTTCTTACATTATGTCTAGACTTCGAGCAGGGGAAATTAATCTAGCTCTGGTTGGAAAAATTGCACCAGAGTCTTATGAAGTATTCATAAATATCATTGAAAGGTGCTTGAAATACAGTTGGAATGAGCGACCAGCAATGGGTGAAGTGGAAGTGGAACTTGAGCGTTCTCTGACTTTGCAGCTGGAAGCAGACACCAGAGATACTAGGCATGATTATCTCACTAGCATTACCCAACCACAACAACAAGAGTCTACCTAG 1104 0.4194 MFLKSLGFDRLRKHTKRPYPTVIEELCHQFSLADLRKATNNFDQNNVIRERICPKVIVYRGCLQLDHVATAVVVKRMSVKLGVEEMKREIELLCQLRHPNLISLIGFCIHKDDICTVFKYMSNGFLSDHLFKRDDHDREPLSWKKRLEICIGVARGVHYLHTGLKRIIIHREIYPNNILLDENMVPKLSDFRHSLQGPLFTTESKPIEGSVYPLAGMPGFMAPEQFNFRNRHYTVVTTDKCDVYSFGMVLCEVVCAEPIYTIIKEKEKIDYYNKKAPSISIRSYIMSRLRAGEINLALVGKIAPESYEVFINIIERCLKYSWNERPAMGEVEVELERSLTLQLEADTRDTRHDYLTSITQPQQQEST* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2741 367 PANTHER TYROSINE KINASE FAMILY PROTEIN 13 355 - -
Lja1g2741 367 SUPERFAMILY Protein kinase-like (PK-like) 17 333 IPR011009 -
Lja1g2741 367 Gene3D Phosphorylase Kinase; domain 1 5 120 - -
Lja1g2741 367 Pfam Protein tyrosine and serine/threonine kinase 58 330 IPR001245 GO:0004672|GO:0006468
Lja1g2741 367 PANTHER OS07G0166700 PROTEIN 13 355 IPR045272 GO:0004714|GO:0006468
Lja1g2741 367 ProSiteProfiles Protein kinase domain profile. 42 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g2741 367 Gene3D Transferase(Phosphotransferase) domain 1 121 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2741 Lja-Chr1 32788479 32789812 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2741 17 349 Receptor kinase-like Gene Family AT5G39000 40.118 5.12e-63 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lja1g2741 PK_Tyr_Ser-Thr 2.3e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2741 - - lja:Lj0g3v0196419.1 578.941