Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2739 ATGTTTTGGAAATTTACATTCCTCATTATATATCCACCCATTTGCATGCAGCAAGGAAAAATGGGCTCAACAGTACCAACTACTTGCATTTGCATGCAGCAAGGAAAAATGGGCTCAACAGCACCAACTACTTGCATTTTGTTCTTGTTTCTACTCTCTTGCATTTGCTTCACTTCAACAGATGCTTATGATCCACTGGATCAGTATGGGAATATCACAATCAAATGGGATATCAAAACCTGGACACCAGATGGTTATGTTGCGGTTGTTACAATGAACAACTTTCAACAATATCGTCATATCGCTGCACCTGGCTGGTCATTAGGATGGACATGGGCCAAAAAGGAGGTAATATGGGGCATGGTGGGGGGGCAGGCCACTGAAGAAGGGGATTGTTCAATGTTTAAGGGAACAATTCCACATTGCTGTAAAAAGGACCCCACAGTAGTAGATTTGCTTCCCGGAACACCTTACAATATGCAATCCTCAAATTGCTGCAAAGGTGGGGTGCTTAGTTCATGGGTACAAGATCTAACCAATGCAGTAGCATCATTTCAAGTCAGTGTTGGTAGAGCTGGAACAACAAAAAAAAAAACTGTCAAACTCCCCAAACACTTCACTTTGAAAGCACCAGGACCAGGTTATACATGTGGGCCAGCAAAAATTGTGACACCCTCTAAATTCATTCAACCAGATAAAAGGAGGGTGACTCAAGCACTCATGACATGGAATGTGACATGCACGTATTCACAATTTCTAGCTCAGAGAACTCCCACTTGCTGTGTCTCCCTCTCGTCTTTTTATAATGATACCATCACACCCTGCCCAACATGTGCTTGTGGTTGCCAGAGTAACTCATCTCGATCAGGGAGCTGTGTAGAGTGCGTTTCTTTGGCTCAGATTGTTTTGATTTCCTTCTAG 921 0.43 MFWKFTFLIIYPPICMQQGKMGSTVPTTCICMQQGKMGSTAPTTCILFLFLLSCICFTSTDAYDPLDQYGNITIKWDIKTWTPDGYVAVVTMNNFQQYRHIAAPGWSLGWTWAKKEVIWGMVGGQATEEGDCSMFKGTIPHCCKKDPTVVDLLPGTPYNMQSSNCCKGGVLSSWVQDLTNAVASFQVSVGRAGTTKKKTVKLPKHFTLKAPGPGYTCGPAKIVTPSKFIQPDKRRVTQALMTWNVTCTYSQFLAQRTPTCCVSLSSFYNDTITPCPTCACGCQSNSSRSGSCVECVSLAQIVLISF* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2739 306 PANTHER PROTEIN COBRA 42 297 IPR006918 GO:0010215|GO:0031225
Lja1g2739 306 PANTHER COBRA-LIKE PROTEIN 42 297 - -
Lja1g2739 306 PIRSF COBRA 36 303 IPR006918 GO:0010215|GO:0031225
Lja1g2739 306 Pfam COBRA-like protein 86 250 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2739 Lja-Chr1 32747442 32749777 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2739 46 294 COBRA Gene Family AT3G02210 73.092 3.80e-133 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2739 - - gmx:100783820 462.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1521 2 14923695 14927930 Lja1g2739 1 32747442 32749777 PCT