Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2735 ATGGCTATCTTCTTCATGGCAATTTTTTGTGTGATCTTGGTGCTCTGTTTTTGCTCTGCTCTCTTGAGGTGGAATGAAGTGAGGTTCAGGAGGGAAGGTTTACCTCCAGGAACAATGGGGTGGCCTGTTTTTGGTGAGACAACTGAGTTTCTCAAGCAAGGTCCAAACTTTATGAAAAACCAGAGGGAAAGGTATGGCAGTTTTTTCAAATCCCACATATTGGGGTGCCCTACCATTGTTTCCATGGATCCAGAGCTTAATAGATATATACTGATGAATGAAGCAAAAGGGCTTGTTCCTGGGTACCCACAATCCATGTTAGATATATTAGGAAAATGCAACATTGCAGCTGTTCATGGCTCCACTCACAAGTACATGAGAGGGGCACTGCTTTCCATCATTAGCCCCACCTTGATCAGAGATCAGCTTTTGCCAAAAATTGATGAGTTCATGAGAACCCACCTTAGTGATTGGGACAACAAAGTCATCAACATTCAAGAGAAAACTAAAGAGATGGCATTTCTCTCTTCTCTGAAGCAGATTGCAGGCATGGAATCAAGCTCAATATCACAGCCTTTCATGTCAGAGTTCTTTAAGCTAGTTTTAGGAACTCTCTCCTTGCCTATTAACCTTCCTGGCACAAATTATCACCAAGGGTTACAAGCAAGGAAGAGCATTATTAGCATTCTGAGTCAACTACTAGAGGAAAGGAGAGCATCCCAAGATAGACACATAGACATGCTTGGATGCTTGATGGGAAGAGAAGATAATAGATACAAACTAACTGATGAGGAAATCATTGATCTAATTATTACAATTATGTATTCTGGTTATGAAACTGTTTCAACCACATCAATGATGGCACTGAAGTACCTCCATGATCATCCCAAAGTTCTTGAAGAAATCAGAAGAGAACATTTTGCCATAAGAGAAAGGAAAAGGCCAGAGGATCCCATTGAGTGCAATGATCTCAAGTCAATGAGGTTTACCCGTGCGGTGATTTTTGAGACCTCGAGATTAGCTACAATAGTCAATGGGGTTCTGAGAAAAACAACACATGACATGGAACTGAACGGCTATTTGATTCCTGAAGGGTGGAGGATATATGTTTATACAAGAGAGATAAATTATGACCCATTTCTGTATCATGATCCACTAAAGTTTAACCCATGGAGATGGCTGGGTAACAGTCTAGAGTCACAAAGCCACTTCTTGATATTTGGAGGAGGCACAAGACAATGTCCAGGAAAGGAGTTGGGGATAGCAGAAATTTCCACTTTCATACACTACTTTGTAACTCGATACAGATGGGAAGAAGTAGGAGGAGATAAACTAATGAAATTTCCTAGAGTTGTGGCACCAAATGGACTGCACATAAGGGTCTCATCTTATTAA 1395 0.4086 MAIFFMAIFCVILVLCFCSALLRWNEVRFRREGLPPGTMGWPVFGETTEFLKQGPNFMKNQRERYGSFFKSHILGCPTIVSMDPELNRYILMNEAKGLVPGYPQSMLDILGKCNIAAVHGSTHKYMRGALLSIISPTLIRDQLLPKIDEFMRTHLSDWDNKVINIQEKTKEMAFLSSLKQIAGMESSSISQPFMSEFFKLVLGTLSLPINLPGTNYHQGLQARKSIISILSQLLEERRASQDRHIDMLGCLMGREDNRYKLTDEEIIDLIITIMYSGYETVSTTSMMALKYLHDHPKVLEEIRREHFAIRERKRPEDPIECNDLKSMRFTRAVIFETSRLATIVNGVLRKTTHDMELNGYLIPEGWRIYVYTREINYDPFLYHDPLKFNPWRWLGNSLESQSHFLIFGGGTRQCPGKELGIAEISTFIHYFVTRYRWEEVGGDKLMKFPRVVAPNGLHIRVSSY* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2735 464 PRINTS P450 superfamily signature 332 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g2735 464 PRINTS P450 superfamily signature 414 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g2735 464 PRINTS P450 superfamily signature 276 293 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g2735 464 PRINTS P450 superfamily signature 405 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g2735 464 PANTHER CYTOCHROME P450 26 8 462 - -
Lja1g2735 464 Pfam Cytochrome P450 35 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g2735 464 SUPERFAMILY Cytochrome P450 28 461 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g2735 464 Gene3D Cytochrome P450 25 462 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g2735 464 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 407 416 IPR017972 GO:0005506|GO:0016705
Lja1g2735 464 PANTHER CYTOCHROME P450 FAMILY PROTEIN 8 462 - -
Lja1g2735 464 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g2735 464 PRINTS E-class P450 group I signature 331 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g2735 464 PRINTS E-class P450 group I signature 265 282 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g2735 464 PRINTS E-class P450 group I signature 285 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g2735 464 PRINTS E-class P450 group I signature 371 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g2735 464 PRINTS E-class P450 group I signature 404 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g2735 464 PRINTS E-class P450 group I signature 414 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2735 Lja-Chr1 32713441 32717808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2735 82 464 Cytochrome P450 AT5G38970 69.271 0.0 565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2735 K09590 - gmx:100785414 864.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2735 1 32713441 32717808 Lja1g2735 1 32713441 32717808 ECH
Lja2g1517 2 14891174 14894699 Lja1g2735 1 32713441 32717808 PCT