Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2701 ATGACGATTGCTAGTCATACACCTAAGACAGAGAAGAAGAAATCAAGGAGAAACAAGGCTGTTGTTGTTGATGAGAAAGCACCCTTGTTGCCCAAAAGCCATGTGGAGGAGAGTGATGCAGGGTTTGATGATTTCAATGGAGCTTCTTTCTCTGGGGCTGTTTTCAACTTGTCCACCACAATTATTGGTGCTGGGATCATGGCCTTGCCTGCAACCTTGAAACAGTTGGGGATGATTCCTGGCCTTCTTGCCATAGTCTTGATGGCTTTGTTGACAGAGAAGTCAATTGAGCTTCTGCTTCGGTTCACCCGGGCGGGGAAGGCTGTTTCATATGCTGGTCTGATGGGGGATTCCTTTGGGAAATATGGAAAAGCTCTTGCTCAGATTTGTGTTATAGTCAATAACATCGGCGTGCTGATTGTTTACATGATTATAATTGGTGATGTGCTCTCTGGGACATCTGCAGGTGGAGATCATCACTCTGGTATCCTTGAAGGCTGGTTTGGTGTGCAATGGTGGACGGGGCGGACATTTATCGTCCTTCTTACCACAGTTGCTATATTTGCACCCTTGTCAAGCTTTAAGCGAATTGATTCTCTGAAATTCACATCTGCCCTTTCAGTCGCGCTAGCAGTTGTTTTTCTTGTCATTGCAGTCGGAATCTCAGTTGTCAAGATTATAAGCGGTGGCATTACCATGCCCAGACTCTTCCCAGCCGTCACTGATTTAACATCAATCTTTAAACTATTCACTGTAGTTCCTGTGTTTGTGACTGCCTATATCTGCCACTACAATGTTCACAGCATAGATAACGAACTTGAGGACTCCTCACAGATGCAAGGGGTTGTTCGTGCCGCCCTTGGTCTATGCTCTTCAGTTTATGTAATGATAAGCTTCTTTGGATTCCTCCTATTTGGCGATGGAACTCTTGACGATGTGCTTGCCAATTTCGATACCAATCTCGGAATTCCTTTCGGTTCTGTGCTCAATGACGCTGTTCGTATAAGCTATGCGTTACACCTTATGCTTGTATTTCCAGTTGTCTTCTATCCATTGCGGCTCAATATAGATGGCCTCCTCTTCTCTTCATCGAGGCCTTTGGTTCTGTCCAACTTTAGATTTGCATCACTCACTGTTGCCCTCATTGGAGTTATCTTCTTGGGAGCAAATTTCATACCTAGCATTTGGGACGCTTTCCAGTTCACCGGAGCAACCGCCGCAGTCTGTATAGGATTCATATTTCCAGCTGCCATCACTCTTAGGGACCGCTACAACATAGCAACAAAATCAGACAAGATTCTTTCTGTCATTCTGATAGTCCTTGCAGTCTTCTCAAACGTTGTGGCTATATACAGTGATGCCTATGCCTTGATCAAGCAGAATAAAACTTCAAAGGAATAA 1401 0.4461 MTIASHTPKTEKKKSRRNKAVVVDEKAPLLPKSHVEESDAGFDDFNGASFSGAVFNLSTTIIGAGIMALPATLKQLGMIPGLLAIVLMALLTEKSIELLLRFTRAGKAVSYAGLMGDSFGKYGKALAQICVIVNNIGVLIVYMIIIGDVLSGTSAGGDHHSGILEGWFGVQWWTGRTFIVLLTTVAIFAPLSSFKRIDSLKFTSALSVALAVVFLVIAVGISVVKIISGGITMPRLFPAVTDLTSIFKLFTVVPVFVTAYICHYNVHSIDNELEDSSQMQGVVRAALGLCSSVYVMISFFGFLLFGDGTLDDVLANFDTNLGIPFGSVLNDAVRISYALHLMLVFPVVFYPLRLNIDGLLFSSSRPLVLSNFRFASLTVALIGVIFLGANFIPSIWDAFQFTGATAAVCIGFIFPAAITLRDRYNIATKSDKILSVILIVLAVFSNVVAIYSDAYALIKQNKTSKE* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2701 466 PANTHER AMINO ACID TRANSPORTER 10 465 - -
Lja1g2701 466 PANTHER AMINO ACID TRANSPORTER AVT6A 10 465 - -
Lja1g2701 466 Pfam Transmembrane amino acid transporter protein 48 452 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2701 Lja-Chr1 31995409 31999533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2701 16 465 Amino Acid or Auxin Permease AAAP Family AT3G30390 70.510 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2701 K14207 - gmx:100795222 789.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2701 1 31995409 31999533 Lja1g2701 1 31995409 31999533 ECH