Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2697 ATGCAGGCCAGTGAGATCACAGGACTCAGCTATTTTCTCCCTTCAGACCCATCTCCTTTCAGCATGATTCAGAACAACAACATCCCCACATTCCAACTACAAAAATTCTCCAACCAATTCTTTGGTTACCAGAATAATCTTCAAGCATTTCAAGACTTCAGTCCTCAGAACTCCTCATCATGCATCAGCAGCAACTCAACCTCTGATGAAGCAGAGGATCAACAACAGCAACAAAGTCTCATCATCAATGAGAGGAAACACAGGAGGATGATATCGAACCGAGAATCAGCGCGCCGGTCCCGGATGAGGAAGCAGAAGCACCTTGATGAGCTTTGGTCGATGGTGGTTTGTCTCAGGAATGAGAATCACCAGCTGCTAGAGAAACTGAACCATCTGTCAGAGTCTCATGATAGAGTGGTTCAAGAGAATGTTCAGCTGAGAGAGGAAACATCAGAGCTTCGCCAAATGATGTGTGTCATGCAGCTACATAGTCCATGTCCTCCATTAAGCCCCCTTGAAGATCATGTCCCAAGTACCCCACCCCATCTTTCTGATTCCTCAAACCAATCAATCACAAGCTCTAGGGACATACTTGGCTAA 600 0.4583 MQASEITGLSYFLPSDPSPFSMIQNNNIPTFQLQKFSNQFFGYQNNLQAFQDFSPQNSSSCISSNSTSDEAEDQQQQQSLIINERKHRRMISNRESARRSRMRKQKHLDELWSMVVCLRNENHQLLEKLNHLSESHDRVVQENVQLREETSELRQMMCVMQLHSPCPPLSPLEDHVPSTPPHLSDSSNQSITSSRDILG* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2697 199 Pfam bZIP transcription factor 85 135 IPR004827 GO:0003700|GO:0006355
Lja1g2697 199 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 198 IPR044521 -
Lja1g2697 199 MobiDBLite consensus disorder prediction 180 199 - -
Lja1g2697 199 CDD bZIP_plant_GBF1 86 137 IPR045314 GO:0003700|GO:0006355
Lja1g2697 199 Gene3D - 83 140 - -
Lja1g2697 199 PANTHER BZIP TRANSCRIPTION FACTOR 1 198 - -
Lja1g2697 199 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 88 103 IPR004827 GO:0003700|GO:0006355
Lja1g2697 199 MobiDBLite consensus disorder prediction 169 199 - -
Lja1g2697 199 Coils Coil 115 149 - -
Lja1g2697 199 SMART brlzneu 81 145 IPR004827 GO:0003700|GO:0006355
Lja1g2697 199 MobiDBLite consensus disorder prediction 58 77 - -
Lja1g2697 199 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 83 146 IPR004827 GO:0003700|GO:0006355
Lja1g2697 199 SUPERFAMILY Leucine zipper domain 85 135 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2697 Lja-Chr1 31946410 31947673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2697 47 165 bZIP Transcription Factor Family AT3G30530 68.852 7.48e-47 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lja1g2697 bZIP_1 9.5e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2697 - - aprc:113863596 256.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2697 1 31946410 31947673 Lja1g2697 1 31946410 31947673 ECH
Lja2g1487 2 14399377 14400451 Lja1g2697 1 31946410 31947673 PCT